set_mass_pev: Parameterise a vaccine mass distribution strategy

In mrc-ide/malariasimulation: An individual based model for malaria

Parameterise a vaccine mass distribution strategy

Description

distribute pre-erythrocytic vaccine to a population in an age range. Efficacy will take effect after the last dose

Usage

set_mass_pev(
  parameters,
  profile,
  timesteps,
  coverages,
  min_ages,
  max_ages,
  min_wait,
  booster_spacing,
  booster_coverage,
  booster_profile
)

Arguments

parameters	a list of parameters to modify
profile	a list of details for the vaccine profile, create with create_pev_profile
timesteps	a vector of timesteps for each round of vaccinations
coverages	the coverage for each round of vaccinations
min_ages	for the target population, inclusive (in timesteps)
max_ages	for the target population, inclusive (in timesteps)
min_wait	the minimum acceptable time since the last vaccination (in timesteps); When using both set_mass_pev and set_pev_epi, this represents the minimum time between an individual being vaccinated under one scheme and vaccinated under another.
booster_spacing	the timesteps (following the final primary dose) at which booster vaccinations are administered
booster_coverage	a matrix of coverages (timesteps x boosters) specifying the proportion the previously vaccinated population to continue receiving booster doses. The rows of the matrix must be the same size as timesteps. The columns of the matrix must be the same size as booster_spacing.
booster_profile	list of lists representing each booster profile, the outer list must be the same length as booster_spacing. Create vaccine profiles with create_pev_profile

mrc-ide/malariasimulation documentation built on Oct. 14, 2024, 7:33 p.m.