Files in mrj31/immdonor
Search Immport for Donors
.gitignore
DESCRIPTION
R/donor_search.r
R/immdonor.Rproj
R/immdonor/immdonor.Rproj
R/panel_parser.R
R/quick_fetch.R
R/source.r
Untitled Diagram.drawio
db/.cache/fontconfig/039b4204-3a95-4c73-a29f-f845237bbf05-le64.cache-7
db/.cache/fontconfig/5ca8086aeacc9c68e81a71e7ef846b3b-le64.cache-7
db/.cache/fontconfig/90716c9a-9a3d-49b3-a369-f74af78e7b5a-le64.cache-7
db/.cache/fontconfig/CACHEDIR.TAG
db/.cache/fontconfig/fe5ac519-df15-4912-8e41-9731ece565a6-le64.cache-7
db/autoload/schema/add_all_foreign_keys.ddl
db/autoload/schema/adverse_event.ddl
db/autoload/schema/arm_2_subject.ddl
db/autoload/schema/arm_or_cohort.ddl
db/autoload/schema/assessment_2_file_info.ddl
db/autoload/schema/assessment_component.ddl
db/autoload/schema/assessment_panel.ddl
db/autoload/schema/biosample.ddl
db/autoload/schema/biosample_2_treatment.ddl
db/autoload/schema/contract_grant.ddl
db/autoload/schema/contract_grant_2_personnel.ddl
db/autoload/schema/contract_grant_2_study.ddl
db/autoload/schema/control_sample.ddl
db/autoload/schema/control_sample_2_file_info.ddl
db/autoload/schema/dropAllTables.ddl
db/autoload/schema/elisa_result.ddl
db/autoload/schema/elispot_result.ddl
db/autoload/schema/experiment.ddl
db/autoload/schema/experiment_2_protocol.ddl
db/autoload/schema/expsample.ddl
db/autoload/schema/expsample_2_biosample.ddl
db/autoload/schema/expsample_2_file_info.ddl
db/autoload/schema/expsample_2_reagent.ddl
db/autoload/schema/expsample_2_treatment.ddl
db/autoload/schema/expsample_mbaa_detail.ddl
db/autoload/schema/expsample_public_repository.ddl
db/autoload/schema/fcs_analyzed_result.ddl
db/autoload/schema/fcs_analyzed_result_marker.ddl
db/autoload/schema/fcs_header.ddl
db/autoload/schema/fcs_header_marker.ddl
db/autoload/schema/fcs_header_marker_2_reagent.ddl
db/autoload/schema/file_info.ddl
db/autoload/schema/hai_result.ddl
db/autoload/schema/hla_typing_result.ddl
db/autoload/schema/immune_exposure.ddl
db/autoload/schema/inclusion_exclusion.ddl
db/autoload/schema/intervention.ddl
db/autoload/schema/kir_typing_result.ddl
db/autoload/schema/lab_test.ddl
db/autoload/schema/lab_test_panel.ddl
db/autoload/schema/lab_test_panel_2_protocol.ddl
db/autoload/schema/lk_adverse_event_severity.ddl
db/autoload/schema/lk_age_event.ddl
db/autoload/schema/lk_analyte.ddl
db/autoload/schema/lk_ancestral_population.ddl
db/autoload/schema/lk_cell_population.ddl
db/autoload/schema/lk_cell_population_marker.ddl
db/autoload/schema/lk_compound_role.ddl
db/autoload/schema/lk_criterion_category.ddl
db/autoload/schema/lk_data_completeness.ddl
db/autoload/schema/lk_disease.ddl
db/autoload/schema/lk_disease_stage.ddl
db/autoload/schema/lk_ethnicity.ddl
db/autoload/schema/lk_exp_measurement_tech.ddl
db/autoload/schema/lk_exposure_material.ddl
db/autoload/schema/lk_exposure_process.ddl
db/autoload/schema/lk_expsample_result_schema.ddl
db/autoload/schema/lk_file_detail.ddl
db/autoload/schema/lk_gender.ddl
db/autoload/schema/lk_lab_test_name.ddl
db/autoload/schema/lk_lab_test_panel_name.ddl
db/autoload/schema/lk_locus_name.ddl
db/autoload/schema/lk_organization.ddl
db/autoload/schema/lk_personnel_role.ddl
db/autoload/schema/lk_plate_type.ddl
db/autoload/schema/lk_protocol_type.ddl
db/autoload/schema/lk_public_repository.ddl
db/autoload/schema/lk_race.ddl
db/autoload/schema/lk_reagent_type.ddl
db/autoload/schema/lk_research_focus.ddl
db/autoload/schema/lk_sample_type.ddl
db/autoload/schema/lk_source_type.ddl
db/autoload/schema/lk_species.ddl
db/autoload/schema/lk_study_file_type.ddl
db/autoload/schema/lk_study_panel.ddl
db/autoload/schema/lk_subject_location.ddl
db/autoload/schema/lk_t0_event.ddl
db/autoload/schema/lk_time_unit.ddl
db/autoload/schema/lk_transcript_type.ddl
db/autoload/schema/lk_unit_of_measure.ddl
db/autoload/schema/lk_user_role_type.ddl
db/autoload/schema/lk_virus_strain.ddl
db/autoload/schema/lk_visibility_category.ddl
db/autoload/schema/mbaa_result.ddl
db/autoload/schema/neut_ab_titer_result.ddl
db/autoload/schema/pcr_result.ddl
db/autoload/schema/period.ddl
db/autoload/schema/personnel.ddl
db/autoload/schema/planned_visit.ddl
db/autoload/schema/program.ddl
db/autoload/schema/program_2_personnel.ddl
db/autoload/schema/protocol.ddl
db/autoload/schema/protocol_deviation.ddl
db/autoload/schema/reagent.ddl
db/autoload/schema/reagent_set_2_reagent.ddl
db/autoload/schema/reference_range.ddl
db/autoload/schema/reported_early_termination.ddl
db/autoload/schema/rna_seq_result.ddl
db/autoload/schema/standard_curve.ddl
db/autoload/schema/standard_curve_2_file_info.ddl
db/autoload/schema/study.ddl
db/autoload/schema/study_2_condition_or_disease.ddl
db/autoload/schema/study_2_panel.ddl
db/autoload/schema/study_2_protocol.ddl
db/autoload/schema/study_categorization.ddl
db/autoload/schema/study_data_release.ddl
db/autoload/schema/study_file.ddl
db/autoload/schema/study_glossary.ddl
db/autoload/schema/study_link.ddl
db/autoload/schema/study_personnel.ddl
db/autoload/schema/study_pubmed.ddl
db/autoload/schema/subject.ddl
db/autoload/schema/subject_measure_definition.ddl
db/autoload/schema/subject_measure_result.ddl
db/autoload/schema/treatment.ddl
db/autoload/schema/workspace.ddl
db/cytoverse/Dockerfile
db/docker-compose.yaml
db/pgdump/immportdonors.pgsql
db/pgdump/pg.load
db/pgloader_migrate.sh
db/postgres-with-pgloader/Dockerfile
metacyto/panel/preprocess_output/Colon.fcs
metacyto/panel/preprocess_output/Ileum.fcs
metacyto/panel/preprocess_output/Inguinal lymph node.fcs
metacyto/panel/preprocess_output/Jejunum.fcs
metacyto/panel/preprocess_output/Lung lymph node.fcs
metacyto/panel/preprocess_output/Lung.fcs
metacyto/panel/preprocess_output/PBMC.fcs
metacyto/panel/preprocess_output/Spleen.fcs
metacyto/panel/preprocess_output/Whole blood.fcs
metacyto/panel/preprocess_output/processed_sample_summary.csv
metacyto/panel/search_output/Colon/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/Colon/density_plot.pdf
metacyto/panel/search_output/Ileum/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/Ileum/density_plot.pdf
metacyto/panel/search_output/Inguinal lymph node/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/Inguinal lymph node/density_plot.pdf
metacyto/panel/search_output/Jejunum/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/Jejunum/density_plot.pdf
metacyto/panel/search_output/Lung lymph node/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/Lung lymph node/density_plot.pdf
metacyto/panel/search_output/Lung/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/Lung/density_plot.pdf
metacyto/panel/search_output/PBMC/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/PBMC/density_plot.pdf
metacyto/panel/search_output/Spleen/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/Spleen/density_plot.pdf
metacyto/panel/search_output/Whole blood/cluster_stats_in_each_sample.csv
metacyto/panel/search_output/Whole blood/density_plot.pdf
readme.md
readme.rmd
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