simu_fwer_emp: Simulate Family Wise Error Rate (FWER) empirically
In mshasan/empOPW: Empirical Method of Optimal Pvalue Weighting
Description
Usage
Arguments
Details
Value
Author(s)
References
See Also
Examples
View source: R/simu_fwer_emp.R
Description
This function simulate family wise error rate or test type I error rate
Usage
1
simu_fwer_emp(s, m, alphaVec, max.group = 5L)
Arguments
s
number of replication in a simulation
m
total number of hypothesis test
alphaVec
a vector of significance levels
max.group
maximum number of p-value groups to be used, minimum is 5
Details
This function generate pvalues times form uniform(0, 1) then applying
OPWeight method to obtain the Familly Wise Error Rate (FWER)
Value
a matrix of fwer for different methods
Author(s)
Mohamad S. Hasan, mshasan@uga.edu
References
Hasan and Schliekelman (2017)
See Also
qvalue
prob_rank_givenEffect
weight_binary
weight_continuous
Examples
1
2
3
simVal = 1 # in actual case use at least simVal = 1000
set.seed(123)
typeIerror_mat = sapply(simVal, simu_fwer_emp, m = 10000, alphaVec = .05)
mshasan/empOPW documentation built on March 1, 2021, 4:19 a.m.
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Description Usage Arguments Details Value Author(s) References See Also Examples
View source: R/simu_fwer_emp.R
Description
This function simulate family wise error rate or test type I error rate
Usage
1 | simu_fwer_emp(s, m, alphaVec, max.group = 5L)
|
Arguments
s |
number of replication in a simulation |
m |
total number of hypothesis test |
alphaVec |
a vector of significance levels |
max.group |
maximum number of p-value groups to be used, minimum is 5 |
Details
This function generate pvalues times form uniform(0, 1) then applying
OPWeight method to obtain the Familly Wise Error Rate (FWER)
Value
a matrix of fwer for different methods
Author(s)
Mohamad S. Hasan, mshasan@uga.edu
References
Hasan and Schliekelman (2017)
See Also
qvalue
prob_rank_givenEffect
weight_binary
weight_continuous
Examples
1 2 3 | simVal = 1 # in actual case use at least simVal = 1000
set.seed(123)
typeIerror_mat = sapply(simVal, simu_fwer_emp, m = 10000, alphaVec = .05)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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