format_igv_seg: Format '.seg' file
In mskcc/facets-suite: Functions to run and parse output from FACETS
View source: R/format-igv-seg.R
format_igv_seg R Documentation
Format '.seg' file
Description
Format Facets output for viewing in IGV.
Usage
format_igv_seg(facets_output, sample_id, normalize = TRUE)
Arguments
facets_output
Facets output, from 'run_facets'.
sample_id
Sample name.
normalize
Adjust copy-number log-ratio by dipLogR.
Value
Segmentation output formatted for IGV.
mskcc/facets-suite documentation built on Sept. 13, 2022, 4:14 a.m.
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View source: R/format-igv-seg.R
| format_igv_seg | R Documentation |
Format '.seg' file
Description
Format Facets output for viewing in IGV.
Usage
format_igv_seg(facets_output, sample_id, normalize = TRUE)
Arguments
facets_output |
Facets output, from 'run_facets'. |
sample_id |
Sample name. |
normalize |
Adjust copy-number log-ratio by dipLogR. |
Value
Segmentation output formatted for IGV.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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