mtdna_test: mtdna test function

In mtDNA-BU/mtdnaANNO: Annotation of mtDNA sequence variations

mtdna test function

Description

Test function for the package

Usage

mtdna_test(coverage_file, allele_file, freq_file, path)

Arguments

coverage_file	Coverage File
allele_file	Allele File
freq_file	Frequency File
path	Path

Value

character

Examples

## Not run: 
#Read input data
coverage_file <- "coverage.csv"
allele_file <- "allele.csv"
freq_file   <- "freq.csv"

coverage <- as.matrix( read.csv(file=coverage_file, sep=",", header=FALSE))
allele <- as.matrix( read.csv(file=allele_file, sep=",", header=FALSE))
freq   <- as.matrix( read.csv(file=freq_file, sep=",", header=FALSE))

mtdna_test(coverage_file=coverage, allele_file=allele, freq_file=freq)

## End(Not run)

mtDNA-BU/mtdnaANNO documentation built on Aug. 11, 2022, 10:57 a.m.