Man pages for muschellij2/atropos
Core Software Infrastructure for 'ANTsR'
| accessor-methods | Extract Image Attributes 'pixeltype' from antsImages |
| antsCompileFlags | return ants compile flags |
| antsCopyImageInfo | Copy header info |
| antsDir | return ANTs binary directory information |
| antsImage | An S4 class for an antsImage |
| antsImageGetSet | antsImageGetSet |
| antsImageRead | Image Read |
| antsImageWrite | Image Write |
| antsIncludes | return ANTs installation information |
| antsLibs | return ants library location |
| antsRegion-class | An S4 class to hold a region of an antsImage |
| antsSetPixels | Set a pixel value at an index |
| antsTransformIndexToPhysicalPoint | Get Spatial Point from Index |
| antsTransformPhysicalPointToIndex | Get Index from Spatial Point |
| antsVersions | antsVersions |
| as.antsImage | Convert Objects into antsImage objects |
| as.array | Coerce antsImage objects to array |
| atropos | FMM Segmentation |
| boxplot.antsImage | Boxplot of Values in an Image |
| brackets | Extract or Replace Parts of antsImage Object |
| coerce_mask | Simple Mask Maker |
| cut.antsImage | Perform Cut on an image |
| density.antsImage | Density of Values in an Image |
| dot-int_antsExtractXptrAsString-numeric-method | #' @aliases .int_antsExtractXptrAsString,antsMatrix-method... |
| error_not_antsImage | Stop if not an antsImage object |
| getANTsRData | getANTsRData |
| getCentroids | Convert an image to the geometric centroids of its signal |
| getMask | Get Mask |
| getNeighborhoodAtVoxel | Get a hypercube neighborhood at a voxel |
| getNeighborhoodInMask | Get neighborhoods for voxels within mask |
| getPixels | Get Pixels |
| grapes-greater-than-grapes | Pipe an object forward |
| hist.antsImage | Histogram of Values in an Image |
| iBind | iBind |
| imageFileNames2ImageList | Simple imageFileNames2ImageListing function. |
| int_antsProcessArguments | Processing arguments for command line parsing |
| is.antsImage | is.antsImage |
| lappend | Simple list append tool |
| makeImage | Simple makeImage function. |
| maskImage | Mask input image by mask image. |
| mask_values | Simple Value extractor for antsImage Values |
| morphology | Morphological image operations |
| plot.antsImage | Plotting an image slice or multi-slice with optional color... |
| quantile.antsImage | Sample Quantiles |
| randomMask | Get a random mask |
| ri | Minimal function for creating r images |
| subset | Subsetting antsImage Objects |
| usePkg | Use any package. If package is not installed, this will... |
