bb_summarize: Summarize Biobank Acceleration File

In muschellij2/biobankr: UK Biobank Accelerometer Analysis

Description

Summarize Biobank Acceleration File

Usage

bb_summarize(
  df,
  unit = "1 minute",
  summarize_func = "mean",
  na.rm = TRUE,
  keep_imputed = TRUE,
  ...
)

bb_summarise(
  df,
  unit = "1 minute",
  summarize_func = "mean",
  na.rm = TRUE,
  keep_imputed = TRUE,
  ...
)

bb_summarize_minute(..., unit = "1 minute")

Arguments

df	A data.frame or tbl from bb_read
unit	unit of summarization, passed to floor_date
summarize_func	Function to use for summarization, passed to summarize
na.rm	Should NAs be removed?
keep_imputed	Should the imputed values be kept in this data set before summarization
...	Additional arguments to pass to summarize_func

Value

A summarized tbl

Examples

file = system.file("test2.csv", package = "biobankr")
df = bb_read(file)
collapsed = bb_summarize(df, unit = "10 seconds")
collapsed = bb_summarize(df, unit = "10 seconds", summarize_func = "median")
collapsed = bb_summarize(df, unit = "15 seconds",
summarize_func = "quantile", probs = 0.25)

muschellij2/biobankr documentation built on April 13, 2020, 7:33 a.m.