README.md
In muschellij2/muschpack: Build Status of All John 'Muschelli' Packages
muschpack
The muschpack package: Provides a build status for all John
‘Muschelli’ ‘GitHub’ packages.
Installation
You can install muschpack from github with:
# install.packages("devtools")
devtools::install_github("muschellij2/muschpack")
Package Check Report
library(muschpack)
library(dplyr)
df = r_package_repos(username = "muschellij2",
travis_type = "dynamic")
#> Warning: All elements of `...` must be named.
#> Did you want `repo_info = c(id, node_id, name, full_name, private, owner.login, owner.id,
#> owner.node_id, owner.avatar_url, owner.gravatar_id, owner.url,
#> owner.html_url, owner.followers_url, owner.following_url,
#> owner.gists_url, owner.starred_url, owner.subscriptions_url,
#> owner.organizations_url, owner.repos_url, owner.events_url,
#> owner.received_events_url, owner.type, owner.site_admin,
#> html_url, description, url, forks_url, keys_url, collaborators_url,
#> teams_url, hooks_url, issue_events_url, events_url, assignees_url,
#> branches_url, tags_url, blobs_url, git_tags_url, git_refs_url,
#> trees_url, statuses_url, languages_url, stargazers_url, contributors_url,
#> subscribers_url, subscription_url, commits_url, git_commits_url,
#> comments_url, issue_comment_url, contents_url, compare_url,
#> merges_url, archive_url, downloads_url, issues_url, pulls_url,
#> milestones_url, notifications_url, labels_url, releases_url,
#> deployments_url, created_at, updated_at, pushed_at, git_url,
#> ssh_url, clone_url, svn_url, size, stargazers_count, watchers_count,
#> has_issues, has_projects, has_downloads, has_wiki, has_pages,
#> forks_count, archived, disabled, license.key, license.name,
#> license.spdx_id, license.node_id, forks, open_issues, watchers,
#> default_branch, permissions.admin, permissions.push, permissions.pull,
#> homepage, license.url)`?
mine = df %>% filter(!fork & r_repo)
mine = mine %>%
filter(!grepl("^test", bare))
mine = package_table(mine)
#> Warning in readLines(file): incomplete final line found on '/var/folders/1s/
#> wrtqcpxn685_zk570bnx9_rr0000gr/T//RtmpxOPqzG/file91af4a44194e_DESCRIPTION'
#> Warning in readLines(file): incomplete final line found on '/var/folders/1s/
#> wrtqcpxn685_zk570bnx9_rr0000gr/T//RtmpxOPqzG/file91af32d7109a_DESCRIPTION'
knitr::kable(mine)
| GitHub Link | Travis Status | Appveyor Status | Number of Issues | Vignettes Folder | Tests Folder | GH Version | CRAN | Downloads |
| :-------------------------------------------------------------------------- | :---------------------------------------------------------------------------------------------------------------------------------------------------------------- | :----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | :---------------------------------------------------------------- | :-------------------------- | :-------------------------- | :--------- | :------------------------------------------------------------------------------------------------------------------------------------------ | :------------------------------------------------------------------------------------------------------------------------------------------------------- |
| rscopus | 
| 
| 6 | | | 0.6.7 | 
| 
|
| flexconn | 
| 
| 3 | | | 0.5.4.1 | 
| 
|
| freesurfer | 
| 
| 3 | | | 1.6.5 | 
| 
|
| fslr | 
| 
| 3 | | | 2.24.4 | 
| 
|
| NiftiArray | 
| 
| 3 | | | 0.99.6.1 | 
| 
|
| didactr | 
| 
| 2 | | | 0.7.1 | 
| 
|
| diffr | 
| 
| 2 | | | 0.1 | 
| 
|
| spm12r | 
| 
| 2 | | | 2.8.1 | 
| 
|
| aal | 
| 
| 1 | | | 0.1.1 | 
| 
|
| bftools | 
| 
| 1 | | | 0.2.3 | 
| 
|
| clever | 
| 
| 1 | | | 0.1.4 | 
| 
|
| clusterRundown | 
| 
| 1 | | | 1.7 | 
| 
|
| dcm2niir | 
| 
| 1 | | | 0.6.9.1 | 
| 
|
| fstnii | 
| 
| 1 | | | 0.0.0.9000 | 
| 
|
| gifti | 
| 
| 1 | | | 0.7.5.9001 | 
| 
|
| glassdoor | 
| 
| 1 | | | 0.8.1 | 
| 
|
| ichseg | 
| 
| 1 | | | 0.17.4 | 
| 
|
| itksnapr | 
| 
| 1 | | | 2.1 | 
| 
|
| kirby21.base | 
| 
| 1 | | | 1.7.2.1 | 
| 
|
| kirby21.t1 | 
| 
| 1 | | | 1.7.0 | 
| 
|
| mrtrix | 
| 
| 1 | | | 0.2.0 | 
| 
|
| neurobase | 
| 
| 1 | | | 1.30.0 | 
| 
|
| neuroc.deps | 
| 
| 1 | | | 0.19.3 | 
| 
|
| papayaWidget | 
| 
| 1 | | | 0.7.0 | 
| 
|
| processVISION | 
| 
| 1 | | | 1.0 | 
| 
|
| text2speech | 
| 
| 1 | | | 0.2.11 | 
| 
|
| afnir | 
| 
| 0 | | | 0.4.6 | 
| 
|
| alvin | 
| 
| 0 | | | 0.3.0 | 
| 
|
| ANTsRCoreWin | 
| 
| 0 | | | 1.0 | 
| 
|
| ariExtra | 
| 
| 0 | | | 0.2.3 | 
| 
|
| atropos | 
| 
| 0 | | | 0.5.7.4 | 
| 
|
| bdr | 
| 
| 0 | | | 0.1.0 | 
| 
|
| bids | 
| 
| 0 | | | 0.2 | 
| 
|
| biobankr | 
| 
| 0 | | | 0.6.5 | 
| 
|
| biostatmethods | 
| 
| 0 | | | 0.1.2 | 
| 
|
| brainR | 
| 
| 0 | | | 1.6.0 | 
| 
|
| captkr | 
| 
| 0 | | | 0.1.0 | 
| 
|
| checkout | 
| 
| 0 | | | 0.1.0 | 
| 
|
| cifti | 
| 
| 0 | | | 0.4.6.0 | 
| 
|
| ct.malf.templates | 
| 
| 0 | | | 0.1.0 | 
| 
|
| dcmsort | 
| 
| 0 | | | 0.3.0 | 
| 
|
| dcmtk | 
| 
| 0 | | | 0.6.8.1 | 
| 
|
| dhs | 
| 
| 0 | | | 0.3.1 | 
| 
|
| distribglm | 
| 
| 0 | | | 0.3.0.9000 | 
| 
|
| drammsr | 
| 
| 0 | | | 2.1 | 
| 
|
| dtitk | 
| 
| 0 | | | 0.1.0 | 
| 
|
| ENARSC2015 | 
| 
| 0 | | | 1.0 | 
| 
|
| extrantsr | 
| 
| 0 | | | 3.9.12.1 | 
| 
|
| fedreporter | 
| 
| 0 | | | 0.2.1 | 
| 
|
| ffmpeg | 
| 
| 0 | | | 0.0.0.9001 | 
| 
|
| fit2csv | 
| 
| 0 | | | 0.0.1 | 
| 
|
| flexconnr | 
| 
| 0 | | | 0.3.2 | 
| 
|
| fragmentation | 
| 
| 0 | | | 0.2.1.9000 | 
| 
|
| gcite | 
| 
| 0 | | | 0.10.1 | 
| 
|
| ggneuro | 
| 
| 0 | | | 0.5.0 | 
| 
|
| ghtravis | 
| 
| 0 | | | 0.15.0 | 
| 
|
| gluc | 
| 
| 0 | | | 0.8.1 | 
| 
|
| googleCite | 
| 
| 0 | | | 1.2 | 
| 
|
| greedyreg | 
| 
| 0 | | | 0.4.1 | 
| 
|
| gsl.source | 
| 
| 0 | | | 0.0.0.9000 | 
| 
|
| I2C2 | 
| 
| 0 | | | 0.2.4 | 
| 
|
| jhudsl | 
| 
| 0 | | | 0.3 | 
| 
|
| jhur | 
| 
| 0 | | | 0.2.0 | 
| 
|
| kirby21 | 
| 
| 0 | | | 1.2.0 | 
| 
|
| kirby21.scan.1 | 
| 
| 0 | | | 1.0 | 
| 
|
| kirby21.scan.2 | 
| 
| 0 | | | 1.0 | 
| 
|
| kirby21.scanner | 
| 
| 0 | | | 1.0 | 
| 
|
| kirby21.asl | 
| 
| 0 | | | 1.7.0 | 
| 
|
| kirby21.det2 | 
| 
| 0 | | | 1.7.0 | 
| 
|
| kirby21.dti | 
| 
| 0 | | | 1.7.0 | 
| 
|
| kirby21.flair | 
| 
| 0 | | | 1.7.0 | 
| 
|
| kirby21.fmri | 
| 
| 0 | | | 1.7.0 | 
| 
|
| kirby21.mt | 
| 
| 0 | | | 1.7.0 | 
| 
|
| kirby21.smri | 
| 
| 0 | | | 1.5 | 
| 
|
| kirby21.survey | 
| 
| 0 | | | 1.7.0 | 
| 
|
| kirby21.t2 | 
| 
| 0 | | | 1.7.0 | 
| 
|
| kirby21.vaso | 
| 
| 0 | | | 1.7.0 | 
| 
|
| latexreadme | 
| 
| 0 | | | 0.1 | 
| 
|
| leanpubr | 
| 
| 0 | | | 0.3.2 | 
| 
|
| limmi | 
| 
| 0 | | | 0.1.0 | 
| 
|
| luna | 
| 
| 0 | | | 0.22.1 | 
| 
|
| lungct | 
| 
| 0 | | | 0.7.6.1 | 
| 
|
| malf.templates | 
| 
| 0 | | | 1.2.0 | 
| 
|
| massr | 
| 
| 0 | | | 1.0 | 
| 
|
| matlabr | 
| 
| 0 | | | 1.5.2 | 
| 
|
| mcclust.ext | 
| 
| 0 | | | 1.0 | 
| 
|
| mFilter | 
| 
| 0 | | | 0.1-4 | 
| 
|
| mni | 
| 
| 0 | | | 0.2.0 | 
| 
|
| ms.lesion | 
| 
| 0 | | | 1.2 | 
| 
|
| mscstts | 
| 
| 0 | | | 0.5.2 | 
| 
|
| msmri | 
| 
| 0 | | | 0.3.1 | 
| 
|
| msseg | 
| 
| 0 | | | 1.1.1 | 
| 
|
| muschflow | 
| 
| 0 | | | 0.8.6 | 
| 
|
| muschmisc | 
| 
| 0 | | | 0.0.1 | 
| 
|
| muschpack | | | 0 | | | 0.7.2 | 
| 
|
| neuroc.deps | 
| 
| 0 | | | 0.17.0 | 
| 
|
| neurocInstall | 
| 
| 0 | | | 0.12.0 | 
| 
|
| nccheck | 
| 
| 0 | | | 0.0.0.9000 | 
| 
|
| neurohcp | 
| 
| 0 | | | 0.8.1 | 
| 
|
| neurometrics | 
| 
| 0 | | | 0.1.0 | 
| 
|
| neurovault | 
| 
| 0 | | | 0.5.6 | 
| 
|
| nitrc | 
| 
| 0 | | | 0.3.0 | 
| 
|
| nsrr | 
| 
| 0 | | | 0.1.5 | 
| 
|
| oro.nifti | 
| 
| 0 | | | 0.10.2 | 
| 
|
| oslerInstall | 
| 
| 0 | | | 0.1 | 
| 
|
| papayar | 
| 
| 0 | | | 1.0 | 
| 
|
| penn115 | 
| 
| 0 | | | 0.1.1 | 
| 
|
| quizr | 
| 
| 0 | | | 0.1.0 | 
| 
|
| rbouts | 
| 
| 0 | | | 0.1.0 | 
| 
|
| rcamino | 
| 
| 0 | | | 0.6.4 | 
| 
|
| rdcm2niix | 
| 
| 0 | | | 0.0.1 | 
| 
|
| recordscreen | 
| 
| 0 | | | 0.2.0 | 
| 
|
| robex | 
| 
| 0 | | | 1.2.6 | 
| 
|
| smallPDF | 
| 
| 0 | | | 1.0 | 
| 
|
| smri.process | 
| 
| 0 | | | 0.8.4 | 
| 
|
| sri24 | 
| 
| 0 | | | 0.1.2 | 
| 
|
| ssgraph | 
| 
| 0 | | | 1.0 | 
| 
|
| stapler | 
| 
| 0 | | | 0.7.1 | 
| 
|
| statamd | 
| 
| 0 | | | 0.2.1.1 | 
| 
|
| SummarizedActigraphy | 
| 
| 0 | | | 0.1.1 | 
| 
|
| talkr | 
| 
| 0 | | | 0.3.2 | 
| 
|
| TiffArray | 
| 
| 0 | | | 0.99.0 | 
| 
|
| transcriptr | 
| 
| 0 | | | 0.3.3 | 
| 
|
| translate | 
| 
| 0 | | | 0.0.0.9000 | 
| 
|
| travisrgl | 
| 
| 0 | | | 0.1.0 | 
| 
|
| video | 
| 
| 0 | | | 0.1.0 | 
| 
|
| webofscience | 
| 
| 0 | | | 0.2.0 | 
| 
|
| WhiteStripe | 
| 
| 0 | | | 2.3.2 | 
| 
|
| workbench | 
| 
| 0 | | | 0.1.0 | 
| 
|
Neuroconductor report
library(muschpack)
library(dplyr)
df = r_package_repos(username = "neuroconductor",
travis_type = "com")
#> Warning: All elements of `...` must be named.
#> Did you want `repo_info = c(id, node_id, name, full_name, private, owner.login, owner.id,
#> owner.node_id, owner.avatar_url, owner.gravatar_id, owner.url,
#> owner.html_url, owner.followers_url, owner.following_url,
#> owner.gists_url, owner.starred_url, owner.subscriptions_url,
#> owner.organizations_url, owner.repos_url, owner.events_url,
#> owner.received_events_url, owner.type, owner.site_admin,
#> html_url, url, forks_url, keys_url, collaborators_url, teams_url,
#> hooks_url, issue_events_url, events_url, assignees_url, branches_url,
#> tags_url, blobs_url, git_tags_url, git_refs_url, trees_url,
#> statuses_url, languages_url, stargazers_url, contributors_url,
#> subscribers_url, subscription_url, commits_url, git_commits_url,
#> comments_url, issue_comment_url, contents_url, compare_url,
#> merges_url, archive_url, downloads_url, issues_url, pulls_url,
#> milestones_url, notifications_url, labels_url, releases_url,
#> deployments_url, created_at, updated_at, pushed_at, git_url,
#> ssh_url, clone_url, svn_url, size, stargazers_count, watchers_count,
#> has_issues, has_projects, has_downloads, has_wiki, has_pages,
#> forks_count, archived, disabled, license.key, license.name,
#> license.spdx_id, license.node_id, forks, open_issues, watchers,
#> default_branch, permissions.admin, permissions.push, permissions.pull,
#> license.url, description)`?
neuroc = package_table(df)
knitr::kable(neuroc)
| GitHub Link | Travis Status | Appveyor Status | Number of Issues | Vignettes Folder | Tests Folder | GH Version | CRAN | Downloads |
| :------------------------------------------------------------------------------- | :-------------------------------------------------------------------------------------------------------------------------------------------------------------------- | :--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | :------------------------------------------------------------------ | :-------------------------- | :-------------------------- | :--------- | :---------------------------------------------------------------------------------------------------------------------------------------- | :----------------------------------------------------------------------------------------------------------------------------------------------------- |
| NA | 
| 
| 1 | | | NA | 
| 
|
| aal | 
| 
| 0 | | | 0.1.1 | | |
| afnir | 
| 
| 0 | | | 0.4.6 | | |
| alvin | 
| 
| 0 | | | 0.3.0 | | |
| ANTsR | 
| 
| 0 | | | 0.5.4.2 | 
| 
|
| ANTsRCore | 
| 
| 0 | | | 0.7.3 | 
| 
|
| NA | 
| 
| 0 | | | NA | 
| 
|
| aws | 
| 
| 0 | | | 2.4-1 | 
| 
|
| bftools | 
| 
| 0 | | | 0.2.2 | | |
| brainKCCA | 
| 
| 0 | | | 0.1.0 | 
| 
|
| brainR | 
| 
| 0 | | | 1.5.2.1 | | |
| cap | 
| 
| 0 | | | 1.0 | 
| 
|
| cfma | 
| 
| 0 | | | 1.0 | 
| 
|
| cifti | 
| 
| 0 | | | 0.4.6.0 | | |
| dcemriS4 | 
| 
| 0 | | | 0.57.1 | 
| 
|
| dcm2niir | 
| 
| 0 | | | 0.6.9.1 | | |
| dcmsort | 
| 
| 0 | | | 0.3.0 | | |
| dcmtk | 
| 
| 0 | | | 0.6.8.1 | | |
| DensParcorr | 
| 
| 0 | | | 1.0 | 
| 
|
| divest | 
| 
| 0 | | | 0.8.1 | 
| 
|
| dti | 
| 
| 0 | | | 1.5.1 | 
| 
|
| eegUtils | 
| 
| 0 | | | 0.4.0 | 
| 
|
| EveTemplate | 
| 
| 0 | | | 1.0.0 | 
| 
|
| extrantsr | 
| 
| 0 | | | 3.9.12.1 | | |
| flexconn | 
| 
| 0 | | | 0.5.4.1 | | |
| fmri | 
| 
| 0 | | | 1.9.3 | 
| 
|
| fmriqa | 
| 
| 0 | | | 0.4.0 | 
| 
|
| freesurfer | 
| 
| 0 | | | 1.6.5 | | |
| fslr | 
| 
| 0 | | | 2.24.2.1 | | |
| gganatogram | 
| 
| 0 | | | 1.1.1 | 
| 
|
| ggBrain | 
| 
| 0 | | | 0.1 | 
| 
|
| ggneuro | 
| 
| 0 | | | 0.5.0 | | |
| ggseg | 
| 
| 0 | | | 1.5.3 | 
| 
|
| ggsegExtra | 
| 
| 0 | | | 1.5 | 
| 
|
| gifti | 
| 
| 0 | | | 0.7.5.9001 | | |
| I2C2 | 
| 
| 0 | | | 0.2.4 | | |
| ichseg | 
| 
| 0 | | | 0.17.3.1 | | |
| ITKR | 
| 
| 0 | | | 0.5.2 | 
| 
|
| itksnapr | 
| 
| 0 | | | 2.1 | | |
| kirby21.asl | 
| 
| 0 | | | 1.7.0 | | |
| kirby21.base | 
| 
| 0 | | | 1.7.2 | | |
| kirby21.det2 | 
| 
| 0 | | | 1.7.0 | | |
| kirby21.dti | 
| 
| 0 | | | 1.7.0 | | |
| kirby21.flair | 
| 
| 0 | | | 1.7.0 | | |
| kirby21.fmri | 
| 
| 0 | | | 1.7.0 | | |
| kirby21.mricloud | 
| 
| 0 | | | 1.0.0 | 
| 
|
| kirby21.mt | 
| 
| 0 | | | 1.7.0 | | |
| kirby21.smri | 
| 
| 0 | | | 1.5 | | |
| kirby21.t1 | 
| 
| 0 | | | 1.7.0 | | |
| kirby21.t2 | 
| 
| 0 | | | 1.7.0 | | |
| kirby21.vaso | 
| 
| 0 | | | 1.7.0 | | |
| LESYMAP | 
| 
| 0 | | | 0.0.0.9221 | 
| 
|
| LINDA | 
| 
| 0 | | | 0.5.1 | 
| 
|
| lungct | 
| 
| 0 | | | 0.7.6.1 | | |
| malf.templates | 
| 
| 0 | | | 0.3.1 | | |
| medals | 
| 
| 0 | | | 0.3.0 | 
| 
|
| mimosa | 
| 
| 0 | | | 0.5.8 | 
| 
|
| mmand | 
| 
| 0 | | | 1.6.0 | 
| 
|
| mni | 
| 
| 0 | | | 0.2.0 | | |
| MNITemplate | 
| 
| 0 | | | 1.0.0 | 
| 
|
| MriCloudR | 
| 
| 0 | | | 0.9.3 | 
| 
|
| MRIcloudT1volumetrics | 
| 
| 0 | | | 0.3.1 | 
| 
|
| msmri | 
| 
| 0 | | | 0.3.1 | | |
| neurobase | 
| 
| 0 | | | 1.28.0 | | |
| neurocInstall | 
| 
| 0 | | | 0.10.1 | | |
| neurocStats | 
| 
| 0 | | | 0.1.2 | 
| 
|
| neurohcp | 
| 
| 0 | | | 0.8.1 | | |
| neurovault | 
| 
| 0 | | | 0.5.6 | | |
| NiftiArray | 
| 
| 0 | | | 0.99.6.1 | | |
| nitrcbot | 
| 
| 0 | | | 1.2 | 
| 
|
| nsrr | 
| 
| 0 | | | 0.1.5 | | |
| oasis | 
| 
| 0 | | | 3.0.1 | 
| 
|
| oro.asl | 
| 
| 0 | | | 0.1.1 | 
| 
|
| oro.dicom | 
| 
| 0 | | | 0.5.2.2 | 
| 
|
| oro.nifti | 
| 
| 0 | | | 0.10.2 | | |
| oro.pet | 
| 
| 0 | | | 0.2.5 | 
| 
|
| pain21 | 
| 
| 0 | | | 0.1.0 | 
| 
|
| papayar | 
| 
| 0 | | | 1.0 | | |
| papayaWidget | 
| 
| 0 | | | 0.6.0 | | |
| pbj | 
| 
| 0 | | | 0.1.6 | 
| 
|
| penn115 | 
| 
| 0 | | | 0.1.1 | | |
| PGICA | 
| 
| 0 | | | 1.0.1 | 
| 
|
| qMRI | 
| 
| 0 | | | 1.2 | 
| 
|
| radtools | 
| 
| 0 | | | 1.0.7.2 | 
| 
|
| RAVEL | 
| 
| 0 | | | 1.2.2 | 
| 
|
| RAVELData | 
| 
| 0 | | | 0.99.1 | 
| 
|
| rcamino | 
| 
| 0 | | | 0.6.4 | | |
| RIA | 
| 
| 0 | | | 1.4.2 | 
| 
|
| RNifti | 
| 
| 0 | | | 1.1.0 | 
| 
|
| RNiftyReg | 
| 
| 0 | | | 2.6.7 | 
| 
|
| robex | 
| 
| 0 | | | 1.2.6 | | |
| ROpenCVLite | 
| 
| 0 | | | 0.3.410 | 
| 
|
| rtapas | 
| 
| 0 | | | 0.0.2 | 
| 
|
| Rvision | 
| 
| 0 | | | 0.3.6 | 
| 
|
| Rxnat | 
| 
| 0 | | | 1.0.7 | 
| 
|
| smri.process | 
| 
| 0 | | | 0.8.4 | | |
| spant | 
| 
| 0 | | | 1.2.1 | 
| 
|
| spm12r | 
| 
| 0 | | | 2.8.1 | | |
| sri24 | 
| 
| 0 | | | 0.1.2 | | |
| stapler | 
| 
| 0 | | | 0.7.0.1 | | |
| sublime | 
| 
| 0 | | | 1.3 | 
| 
|
| voxel | 
| 
| 0 | | | 1.3.5 | 
| 
|
| waveslim | 
| 
| 0 | | | 1.8.0 | 
| 
|
| wf4ni | 
| 
| 0 | | | 0.2.0 | 
| 
|
| WhiteStripe | 
| 
| 0 | | | 2.3.2 | | |
muschellij2/muschpack documentation built on March 21, 2020, 9:20 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
muschpack
The muschpack package: Provides a build status for all John
‘Muschelli’ ‘GitHub’ packages.
Installation
You can install muschpack from github with:
# install.packages("devtools")
devtools::install_github("muschellij2/muschpack")
Package Check Report
library(muschpack)
library(dplyr)
df = r_package_repos(username = "muschellij2",
travis_type = "dynamic")
#> Warning: All elements of `...` must be named.
#> Did you want `repo_info = c(id, node_id, name, full_name, private, owner.login, owner.id,
#> owner.node_id, owner.avatar_url, owner.gravatar_id, owner.url,
#> owner.html_url, owner.followers_url, owner.following_url,
#> owner.gists_url, owner.starred_url, owner.subscriptions_url,
#> owner.organizations_url, owner.repos_url, owner.events_url,
#> owner.received_events_url, owner.type, owner.site_admin,
#> html_url, description, url, forks_url, keys_url, collaborators_url,
#> teams_url, hooks_url, issue_events_url, events_url, assignees_url,
#> branches_url, tags_url, blobs_url, git_tags_url, git_refs_url,
#> trees_url, statuses_url, languages_url, stargazers_url, contributors_url,
#> subscribers_url, subscription_url, commits_url, git_commits_url,
#> comments_url, issue_comment_url, contents_url, compare_url,
#> merges_url, archive_url, downloads_url, issues_url, pulls_url,
#> milestones_url, notifications_url, labels_url, releases_url,
#> deployments_url, created_at, updated_at, pushed_at, git_url,
#> ssh_url, clone_url, svn_url, size, stargazers_count, watchers_count,
#> has_issues, has_projects, has_downloads, has_wiki, has_pages,
#> forks_count, archived, disabled, license.key, license.name,
#> license.spdx_id, license.node_id, forks, open_issues, watchers,
#> default_branch, permissions.admin, permissions.push, permissions.pull,
#> homepage, license.url)`?
mine = df %>% filter(!fork & r_repo)
mine = mine %>%
filter(!grepl("^test", bare))
mine = package_table(mine)
#> Warning in readLines(file): incomplete final line found on '/var/folders/1s/
#> wrtqcpxn685_zk570bnx9_rr0000gr/T//RtmpxOPqzG/file91af4a44194e_DESCRIPTION'
#> Warning in readLines(file): incomplete final line found on '/var/folders/1s/
#> wrtqcpxn685_zk570bnx9_rr0000gr/T//RtmpxOPqzG/file91af32d7109a_DESCRIPTION'
knitr::kable(mine)
| GitHub Link | Travis Status | Appveyor Status | Number of Issues | Vignettes Folder | Tests Folder | GH Version | CRAN | Downloads |
| :-------------------------------------------------------------------------- | :---------------------------------------------------------------------------------------------------------------------------------------------------------------- | :----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | :---------------------------------------------------------------- | :-------------------------- | :-------------------------- | :--------- | :------------------------------------------------------------------------------------------------------------------------------------------ | :------------------------------------------------------------------------------------------------------------------------------------------------------- |
| rscopus | | | 6 | | | 0.6.7 |
|
|
| flexconn |
| | 3 | | | 0.5.4.1 |
|
|
| freesurfer |
| | 3 | | | 1.6.5 |
|
|
| fslr |
| | 3 | | | 2.24.4 |
|
|
| NiftiArray |
| | 3 | | | 0.99.6.1 |
|
|
| didactr |
| | 2 | | | 0.7.1 |
|
|
| diffr |
| | 2 | | | 0.1 |
|
|
| spm12r |
| | 2 | | | 2.8.1 |
|
|
| aal |
| | 1 | | | 0.1.1 |
|
|
| bftools |
| | 1 | | | 0.2.3 |
|
|
| clever |
| | 1 | | | 0.1.4 |
|
|
| clusterRundown |
| | 1 | | | 1.7 |
|
|
| dcm2niir |
| | 1 | | | 0.6.9.1 |
|
|
| fstnii |
| | 1 | | | 0.0.0.9000 |
|
|
| gifti |
| | 1 | | | 0.7.5.9001 |
|
|
| glassdoor |
| | 1 | | | 0.8.1 |
|
|
| ichseg |
| | 1 | | | 0.17.4 |
|
|
| itksnapr |
| | 1 | | | 2.1 |
|
|
| kirby21.base |
| | 1 | | | 1.7.2.1 |
|
|
| kirby21.t1 |
| | 1 | | | 1.7.0 |
|
|
| mrtrix |
| | 1 | | | 0.2.0 |
|
|
| neurobase |
| | 1 | | | 1.30.0 |
|
|
| neuroc.deps |
| | 1 | | | 0.19.3 |
|
|
| papayaWidget |
| | 1 | | | 0.7.0 |
|
|
| processVISION |
| | 1 | | | 1.0 |
|
|
| text2speech |
| | 1 | | | 0.2.11 |
|
|
| afnir |
| | 0 | | | 0.4.6 |
|
|
| alvin |
| | 0 | | | 0.3.0 |
|
|
| ANTsRCoreWin |
| | 0 | | | 1.0 |
|
|
| ariExtra |
| | 0 | | | 0.2.3 |
|
|
| atropos |
| | 0 | | | 0.5.7.4 |
|
|
| bdr |
| | 0 | | | 0.1.0 |
|
|
| bids |
| | 0 | | | 0.2 |
|
|
| biobankr |
| | 0 | | | 0.6.5 |
|
|
| biostatmethods |
| | 0 | | | 0.1.2 |
|
|
| brainR |
| | 0 | | | 1.6.0 |
|
|
| captkr |
| | 0 | | | 0.1.0 |
|
|
| checkout |
| | 0 | | | 0.1.0 |
|
|
| cifti |
| | 0 | | | 0.4.6.0 |
|
|
| ct.malf.templates |
| | 0 | | | 0.1.0 |
|
|
| dcmsort |
| | 0 | | | 0.3.0 |
|
|
| dcmtk |
| | 0 | | | 0.6.8.1 |
|
|
| dhs |
| | 0 | | | 0.3.1 |
|
|
| distribglm |
| | 0 | | | 0.3.0.9000 |
|
|
| drammsr |
| | 0 | | | 2.1 |
|
|
| dtitk |
| | 0 | | | 0.1.0 |
|
|
| ENARSC2015 |
| | 0 | | | 1.0 |
|
|
| extrantsr |
| | 0 | | | 3.9.12.1 |
|
|
| fedreporter |
| | 0 | | | 0.2.1 |
|
|
| ffmpeg |
| | 0 | | | 0.0.0.9001 |
|
|
| fit2csv |
| | 0 | | | 0.0.1 |
|
|
| flexconnr |
| | 0 | | | 0.3.2 |
|
|
| fragmentation |
| | 0 | | | 0.2.1.9000 |
|
|
| gcite |
| | 0 | | | 0.10.1 |
|
|
| ggneuro |
| | 0 | | | 0.5.0 |
|
|
| ghtravis |
| | 0 | | | 0.15.0 |
|
|
| gluc |
| | 0 | | | 0.8.1 |
|
|
| googleCite |
| | 0 | | | 1.2 |
|
|
| greedyreg |
| | 0 | | | 0.4.1 |
|
|
| gsl.source |
| | 0 | | | 0.0.0.9000 |
|
|
| I2C2 |
| | 0 | | | 0.2.4 |
|
|
| jhudsl |
| | 0 | | | 0.3 |
|
|
| jhur |
| | 0 | | | 0.2.0 |
|
|
| kirby21 |
| | 0 | | | 1.2.0 |
|
|
| kirby21.scan.1 |
| | 0 | | | 1.0 |
|
|
| kirby21.scan.2 |
| | 0 | | | 1.0 |
|
|
| kirby21.scanner |
| | 0 | | | 1.0 |
|
|
| kirby21.asl |
| | 0 | | | 1.7.0 |
|
|
| kirby21.det2 |
| | 0 | | | 1.7.0 |
|
|
| kirby21.dti |
| | 0 | | | 1.7.0 |
|
|
| kirby21.flair |
| | 0 | | | 1.7.0 |
|
|
| kirby21.fmri |
| | 0 | | | 1.7.0 |
|
|
| kirby21.mt |
| | 0 | | | 1.7.0 |
|
|
| kirby21.smri |
| | 0 | | | 1.5 |
|
|
| kirby21.survey |
| | 0 | | | 1.7.0 |
|
|
| kirby21.t2 |
| | 0 | | | 1.7.0 |
|
|
| kirby21.vaso |
| | 0 | | | 1.7.0 |
|
|
| latexreadme |
| | 0 | | | 0.1 |
|
|
| leanpubr |
| | 0 | | | 0.3.2 |
|
|
| limmi |
| | 0 | | | 0.1.0 |
|
|
| luna |
| | 0 | | | 0.22.1 |
|
|
| lungct |
| | 0 | | | 0.7.6.1 |
|
|
| malf.templates |
| | 0 | | | 1.2.0 |
|
|
| massr |
| | 0 | | | 1.0 |
|
|
| matlabr |
| | 0 | | | 1.5.2 |
|
|
| mcclust.ext |
| | 0 | | | 1.0 |
|
|
| mFilter |
| | 0 | | | 0.1-4 |
|
|
| mni |
| | 0 | | | 0.2.0 |
|
|
| ms.lesion |
| | 0 | | | 1.2 |
|
|
| mscstts |
| | 0 | | | 0.5.2 |
|
|
| msmri |
| | 0 | | | 0.3.1 |
|
|
| msseg |
| | 0 | | | 1.1.1 |
|
|
| muschflow |
| | 0 | | | 0.8.6 |
|
|
| muschmisc |
| | 0 | | | 0.0.1 |
|
|
| muschpack |
| | 0 | | | 0.7.2 |
|
|
| neuroc.deps |
| | 0 | | | 0.17.0 |
|
|
| neurocInstall |
| | 0 | | | 0.12.0 |
|
|
| nccheck |
| | 0 | | | 0.0.0.9000 |
|
|
| neurohcp |
| | 0 | | | 0.8.1 |
|
|
| neurometrics |
| | 0 | | | 0.1.0 |
|
|
| neurovault |
| | 0 | | | 0.5.6 |
|
|
| nitrc |
| | 0 | | | 0.3.0 |
|
|
| nsrr |
| | 0 | | | 0.1.5 |
|
|
| oro.nifti |
| | 0 | | | 0.10.2 |
|
|
| oslerInstall |
| | 0 | | | 0.1 |
|
|
| papayar |
| | 0 | | | 1.0 |
|
|
| penn115 |
| | 0 | | | 0.1.1 |
|
|
| quizr |
| | 0 | | | 0.1.0 |
|
|
| rbouts |
| | 0 | | | 0.1.0 |
|
|
| rcamino |
| | 0 | | | 0.6.4 |
|
|
| rdcm2niix |
| | 0 | | | 0.0.1 |
|
|
| recordscreen |
| | 0 | | | 0.2.0 |
|
|
| robex |
| | 0 | | | 1.2.6 |
|
|
| smallPDF |
| | 0 | | | 1.0 |
|
|
| smri.process |
| | 0 | | | 0.8.4 |
|
|
| sri24 |
| | 0 | | | 0.1.2 |
|
|
| ssgraph |
| | 0 | | | 1.0 |
|
|
| stapler |
| | 0 | | | 0.7.1 |
|
|
| statamd |
| | 0 | | | 0.2.1.1 |
|
|
| SummarizedActigraphy |
| | 0 | | | 0.1.1 |
|
|
| talkr |
| | 0 | | | 0.3.2 |
|
|
| TiffArray |
| | 0 | | | 0.99.0 |
|
|
| transcriptr |
| | 0 | | | 0.3.3 |
|
|
| translate |
| | 0 | | | 0.0.0.9000 |
|
|
| travisrgl |
| | 0 | | | 0.1.0 |
|
|
| video |
| | 0 | | | 0.1.0 |
|
|
| webofscience |
| | 0 | | | 0.2.0 |
|
|
| WhiteStripe |
| | 0 | | | 2.3.2 |
|
|
| workbench |
| | 0 | | | 0.1.0 |
|
|
Neuroconductor report
library(muschpack)
library(dplyr)
df = r_package_repos(username = "neuroconductor",
travis_type = "com")
#> Warning: All elements of `...` must be named.
#> Did you want `repo_info = c(id, node_id, name, full_name, private, owner.login, owner.id,
#> owner.node_id, owner.avatar_url, owner.gravatar_id, owner.url,
#> owner.html_url, owner.followers_url, owner.following_url,
#> owner.gists_url, owner.starred_url, owner.subscriptions_url,
#> owner.organizations_url, owner.repos_url, owner.events_url,
#> owner.received_events_url, owner.type, owner.site_admin,
#> html_url, url, forks_url, keys_url, collaborators_url, teams_url,
#> hooks_url, issue_events_url, events_url, assignees_url, branches_url,
#> tags_url, blobs_url, git_tags_url, git_refs_url, trees_url,
#> statuses_url, languages_url, stargazers_url, contributors_url,
#> subscribers_url, subscription_url, commits_url, git_commits_url,
#> comments_url, issue_comment_url, contents_url, compare_url,
#> merges_url, archive_url, downloads_url, issues_url, pulls_url,
#> milestones_url, notifications_url, labels_url, releases_url,
#> deployments_url, created_at, updated_at, pushed_at, git_url,
#> ssh_url, clone_url, svn_url, size, stargazers_count, watchers_count,
#> has_issues, has_projects, has_downloads, has_wiki, has_pages,
#> forks_count, archived, disabled, license.key, license.name,
#> license.spdx_id, license.node_id, forks, open_issues, watchers,
#> default_branch, permissions.admin, permissions.push, permissions.pull,
#> license.url, description)`?
neuroc = package_table(df)
knitr::kable(neuroc)
| GitHub Link | Travis Status | Appveyor Status | Number of Issues | Vignettes Folder | Tests Folder | GH Version | CRAN | Downloads |
| :------------------------------------------------------------------------------- | :-------------------------------------------------------------------------------------------------------------------------------------------------------------------- | :--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | :------------------------------------------------------------------ | :-------------------------- | :-------------------------- | :--------- | :---------------------------------------------------------------------------------------------------------------------------------------- | :----------------------------------------------------------------------------------------------------------------------------------------------------- |
| NA | | | 1 | | | NA |
|
|
| aal |
| | 0 | | | 0.1.1 |
|
|
| afnir |
| | 0 | | | 0.4.6 |
|
|
| alvin |
| | 0 | | | 0.3.0 |
|
|
| ANTsR |
| | 0 | | | 0.5.4.2 |
|
|
| ANTsRCore |
| | 0 | | | 0.7.3 |
|
|
| NA |
| | 0 | | | NA |
|
|
| aws |
| | 0 | | | 2.4-1 |
|
|
| bftools |
| | 0 | | | 0.2.2 |
|
|
| brainKCCA |
| | 0 | | | 0.1.0 |
|
|
| brainR |
| | 0 | | | 1.5.2.1 |
|
|
| cap |
| | 0 | | | 1.0 |
|
|
| cfma |
| | 0 | | | 1.0 |
|
|
| cifti |
| | 0 | | | 0.4.6.0 |
|
|
| dcemriS4 |
| | 0 | | | 0.57.1 |
|
|
| dcm2niir |
| | 0 | | | 0.6.9.1 |
|
|
| dcmsort |
| | 0 | | | 0.3.0 |
|
|
| dcmtk |
| | 0 | | | 0.6.8.1 |
|
|
| DensParcorr |
| | 0 | | | 1.0 |
|
|
| divest |
| | 0 | | | 0.8.1 |
|
|
| dti |
| | 0 | | | 1.5.1 |
|
|
| eegUtils |
| | 0 | | | 0.4.0 |
|
|
| EveTemplate |
| | 0 | | | 1.0.0 |
|
|
| extrantsr |
| | 0 | | | 3.9.12.1 |
|
|
| flexconn |
| | 0 | | | 0.5.4.1 |
|
|
| fmri |
| | 0 | | | 1.9.3 |
|
|
| fmriqa |
| | 0 | | | 0.4.0 |
|
|
| freesurfer |
| | 0 | | | 1.6.5 |
|
|
| fslr |
| | 0 | | | 2.24.2.1 |
|
|
| gganatogram |
| | 0 | | | 1.1.1 |
|
|
| ggBrain |
| | 0 | | | 0.1 |
|
|
| ggneuro |
| | 0 | | | 0.5.0 |
|
|
| ggseg |
| | 0 | | | 1.5.3 |
|
|
| ggsegExtra |
| | 0 | | | 1.5 |
|
|
| gifti |
| | 0 | | | 0.7.5.9001 |
|
|
| I2C2 |
| | 0 | | | 0.2.4 |
|
|
| ichseg |
| | 0 | | | 0.17.3.1 |
|
|
| ITKR |
| | 0 | | | 0.5.2 |
|
|
| itksnapr |
| | 0 | | | 2.1 |
|
|
| kirby21.asl |
| | 0 | | | 1.7.0 |
|
|
| kirby21.base |
| | 0 | | | 1.7.2 |
|
|
| kirby21.det2 |
| | 0 | | | 1.7.0 |
|
|
| kirby21.dti |
| | 0 | | | 1.7.0 |
|
|
| kirby21.flair |
| | 0 | | | 1.7.0 |
|
|
| kirby21.fmri |
| | 0 | | | 1.7.0 |
|
|
| kirby21.mricloud |
| | 0 | | | 1.0.0 |
|
|
| kirby21.mt |
| | 0 | | | 1.7.0 |
|
|
| kirby21.smri |
| | 0 | | | 1.5 |
|
|
| kirby21.t1 |
| | 0 | | | 1.7.0 |
|
|
| kirby21.t2 |
| | 0 | | | 1.7.0 |
|
|
| kirby21.vaso |
| | 0 | | | 1.7.0 |
|
|
| LESYMAP |
| | 0 | | | 0.0.0.9221 |
|
|
| LINDA |
| | 0 | | | 0.5.1 |
|
|
| lungct |
| | 0 | | | 0.7.6.1 |
|
|
| malf.templates |
| | 0 | | | 0.3.1 |
|
|
| medals |
| | 0 | | | 0.3.0 |
|
|
| mimosa |
| | 0 | | | 0.5.8 |
|
|
| mmand |
| | 0 | | | 1.6.0 |
|
|
| mni |
| | 0 | | | 0.2.0 |
|
|
| MNITemplate |
| | 0 | | | 1.0.0 |
|
|
| MriCloudR |
| | 0 | | | 0.9.3 |
|
|
| MRIcloudT1volumetrics |
| | 0 | | | 0.3.1 |
|
|
| msmri |
| | 0 | | | 0.3.1 |
|
|
| neurobase |
| | 0 | | | 1.28.0 |
|
|
| neurocInstall |
| | 0 | | | 0.10.1 |
|
|
| neurocStats |
| | 0 | | | 0.1.2 |
|
|
| neurohcp |
| | 0 | | | 0.8.1 |
|
|
| neurovault |
| | 0 | | | 0.5.6 |
|
|
| NiftiArray |
| | 0 | | | 0.99.6.1 |
|
|
| nitrcbot |
| | 0 | | | 1.2 |
|
|
| nsrr |
| | 0 | | | 0.1.5 |
|
|
| oasis |
| | 0 | | | 3.0.1 |
|
|
| oro.asl |
| | 0 | | | 0.1.1 |
|
|
| oro.dicom |
| | 0 | | | 0.5.2.2 |
|
|
| oro.nifti |
| | 0 | | | 0.10.2 |
|
|
| oro.pet |
| | 0 | | | 0.2.5 |
|
|
| pain21 |
| | 0 | | | 0.1.0 |
|
|
| papayar |
| | 0 | | | 1.0 |
|
|
| papayaWidget |
| | 0 | | | 0.6.0 |
|
|
| pbj |
| | 0 | | | 0.1.6 |
|
|
| penn115 |
| | 0 | | | 0.1.1 |
|
|
| PGICA |
| | 0 | | | 1.0.1 |
|
|
| qMRI |
| | 0 | | | 1.2 |
|
|
| radtools |
| | 0 | | | 1.0.7.2 |
|
|
| RAVEL |
| | 0 | | | 1.2.2 |
|
|
| RAVELData |
| | 0 | | | 0.99.1 |
|
|
| rcamino |
| | 0 | | | 0.6.4 |
|
|
| RIA |
| | 0 | | | 1.4.2 |
|
|
| RNifti |
| | 0 | | | 1.1.0 |
|
|
| RNiftyReg |
| | 0 | | | 2.6.7 |
|
|
| robex |
| | 0 | | | 1.2.6 |
|
|
| ROpenCVLite |
| | 0 | | | 0.3.410 |
|
|
| rtapas |
| | 0 | | | 0.0.2 |
|
|
| Rvision |
| | 0 | | | 0.3.6 |
|
|
| Rxnat |
| | 0 | | | 1.0.7 |
|
|
| smri.process |
| | 0 | | | 0.8.4 |
|
|
| spant |
| | 0 | | | 1.2.1 |
|
|
| spm12r |
| | 0 | | | 2.8.1 |
|
|
| sri24 |
| | 0 | | | 0.1.2 |
|
|
| stapler |
| | 0 | | | 0.7.0.1 |
|
|
| sublime |
| | 0 | | | 1.3 |
|
|
| voxel |
| | 0 | | | 1.3.5 |
|
|
| waveslim |
| | 0 | | | 1.8.0 |
|
|
| wf4ni |
| | 0 | | | 0.2.0 |
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| WhiteStripe |
| | 0 | | | 2.3.2 |
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