dna.complement: Complement (and reverse) DNA sequence
In mw55309/viRome_legacy: Analysis and visualisation of short-read sequencing data from virus-infection studies
Description
Usage
Arguments
Details
Value
Author(s)
References
Examples
View source: R/viRome_functions.R
View source: R/dna.complement.R
Description
Complement (and optionally reverse) a DNA or RNA sequence
Usage
1
dna.complement(x = NULL, reverse = TRUE)
Arguments
x
A single character string consisting of characters from [AGCTagctNn]
reverse
Logical - whether to reverse the result too. Default: TRUE
Details
This function will complement DNA and RNA sequence according to the rules of DNA complementarity, and optionally reverse the result
Value
A string is returned
Author(s)
Mick Watson (mick.watson@roslin.ed.ac.uk)
References
http://en.wikipedia.org/wiki/Complementarity_
Examples
1
2
3
4
seq <- "AGCTAGCTAGCT"
dna.complement(seq)
dna.complement(seq, reverse=FALSE)
mw55309/viRome_legacy documentation built on Dec. 21, 2021, 11:05 p.m.
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Description Usage Arguments Details Value Author(s) References Examples
View source: R/viRome_functions.R View source: R/dna.complement.R
Description
Complement (and optionally reverse) a DNA or RNA sequence
Usage
1 | dna.complement(x = NULL, reverse = TRUE)
|
Arguments
x |
A single character string consisting of characters from [AGCTagctNn] |
reverse |
Logical - whether to reverse the result too. Default: TRUE |
Details
This function will complement DNA and RNA sequence according to the rules of DNA complementarity, and optionally reverse the result
Value
A string is returned
Author(s)
Mick Watson (mick.watson@roslin.ed.ac.uk)
References
http://en.wikipedia.org/wiki/Complementarity_
Examples
1 2 3 4 | seq <- "AGCTAGCTAGCT"
dna.complement(seq)
dna.complement(seq, reverse=FALSE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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