Files in mwpennell/geiger-v2
Analysis of Evolutionary Diversification
.Rbuildignore
.gitignore
.travis.yml
ChangeLog
DESCRIPTION
Makefile
NAMESPACE
R/TESTING.R
R/congruify.R
R/deprecated.R
R/disparity.R
R/diversification.R
R/diversitree.R
R/edges.R
R/examples.R
R/gbresolve.R
R/glomogram.R
R/internal.R
R/likelihood.R
R/mecca.R
R/medusa.R
R/plotting.R
R/postpred.R
R/proposals.R
R/rjmcmc.R
R/simulation.R
R/traits-fossil.R
R/traits.R
R/utilities-misc.R
R/utilities-phylo.R
R/utilities-print.R
R/utilities-stat.R
README.md
data/amphibia.rda
data/caniformia.rda
data/carnivores.rda
data/caudata.rda
data/chelonia.rda
data/geospiza.rda
data/primates.rda
data/whales.rda
geiger-v2.Rproj
inst/CITATION
man/aicm.Rd
man/aicw.Rd
man/aov.phylo.Rd
man/bd.ms.Rd
man/calibrate.mecca.Rd
man/calibrate.rjmcmc.Rd
man/congruify.phylo.Rd
man/dcount.Rd
man/drop.extinct.Rd
man/dtt.Rd
man/fitContinuous.Rd
man/fitContinuousMCMC.Rd
man/fitDiscrete.Rd
man/gbresolve.Rd
man/geiger-data.Rd
man/geiger-defunct.Rd
man/geiger-examples.Rd
man/geiger-internal.Rd
man/geiger-package.Rd
man/load.rjmcmc.Rd
man/make.gbm.Rd
man/mecca.Rd
man/medusa.Rd
man/name.check.Rd
man/nh.test.Rd
man/nodelabel.phylo.Rd
man/plot.medusa.Rd
man/pp.mcmc.Rd
man/r8s.phylo.Rd
man/ratematrix.Rd
man/rc.Rd
man/rescale.phylo.Rd
man/rjmcmc.bm.Rd
man/sim.bd.Rd
man/sim.bdtree.Rd
man/sim.char.Rd
man/startingpt.mecca.Rd
man/subset.phylo.Rd
man/tips.Rd
man/to.auteur.Rd
man/treedata.Rd
src-i386/APE_reorder_phylo.c
src-i386/Makevars
src-i386/Makevars.win
src-i386/branches.cpp
src-i386/init.c
src-i386/mkn.c
src-i386/mkn.h
src-i386/pic.c
src-i386/symbols.rds
src-i386/util.c
src-i386/util.h
src-i386/utilities.cpp
src/APE_reorder_phylo.c
src/Makevars
src/Makevars.win
src/branches.cpp
src/geiger.dll
src/init.c
src/mkn.c
src/mkn.h
src/pic.c
src/util.c
src/util.h
src/utilities.cpp
