SampleGeneVariations: Generates a vcf file based on a given list of gene symbols
In mxrcx/Omicsimulator: Omicsimulator - Simulation of gene expression rates of various cancer samples
Description
Usage
Arguments
Value
Examples
View source: R/SampleGeneVariations.R
Description
Gets gene range of every gene with variations, Searches for possible variations in this range, Writes vcf entry for first variation. Prints complete vcf file.
Usage
1
2
SampleGeneVariations(disease, output_directory, genes_variation,
file_prefix)
Arguments
disease
String; cancer name
output_directory
String; name of the output directory
genes_variation
List; genes with variations
file_prefix
String; name of the results output file
Value
None
Examples
1
SampleGeneVariations(genes.variation)
mxrcx/Omicsimulator documentation built on Oct. 4, 2019, 3 a.m.
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Description Usage Arguments Value Examples
View source: R/SampleGeneVariations.R
Description
Gets gene range of every gene with variations, Searches for possible variations in this range, Writes vcf entry for first variation. Prints complete vcf file.
Usage
1 2 | SampleGeneVariations(disease, output_directory, genes_variation,
file_prefix)
|
Arguments
disease |
String; cancer name |
output_directory |
String; name of the output directory |
genes_variation |
List; genes with variations |
file_prefix |
String; name of the results output file |
Value
None
Examples
1 | SampleGeneVariations(genes.variation)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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