bhy_threshold: Function to apply the Benjamini-Hochberg-Yekutieli procedure...
In mxxptian/GraceAKO: Grace-AKO: A Novel and Stable Knockoff Filter for Variable Selection Incorporating Gene Network Structures
View source: R/bhy_threshold.R
bhy_threshold R Documentation
Function to apply the Benjamini-Hochberg-Yekutieli procedure for controlling FDR
Description
Function to apply the Benjamini-Hochberg-Yekutieli procedure for controlling FDR
Usage
bhy_threshold(pvals, reshaping_function = NULL, fdr = 0.1)
Arguments
pvals
a vector of the feature statistics, AGCs
reshaping_function
the default value for reshaping function can be referred by Benjamini & Yekutieli (2001) otherwise, the reshaping function can be referred by Ramdas et al (2017)
fdr
the pre-specified false discovery rate level
Value
The threshold value corresponding tthe Benjamini-Hochberg-Yekutieli procedure
mxxptian/GraceAKO documentation built on Oct. 5, 2022, 11:17 p.m.
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View source: R/bhy_threshold.R
| bhy_threshold | R Documentation |
Function to apply the Benjamini-Hochberg-Yekutieli procedure for controlling FDR
Description
Function to apply the Benjamini-Hochberg-Yekutieli procedure for controlling FDR
Usage
bhy_threshold(pvals, reshaping_function = NULL, fdr = 0.1)
Arguments
pvals |
a vector of the feature statistics, AGCs |
reshaping_function |
the default value for reshaping function can be referred by Benjamini & Yekutieli (2001) otherwise, the reshaping function can be referred by Ramdas et al (2017) |
fdr |
the pre-specified false discovery rate level |
Value
The threshold value corresponding tthe Benjamini-Hochberg-Yekutieli procedure
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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