Files in n8thangreen/CEdecisiontree
Cost-effectiveness decision tree analysis

.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
CEdecisiontree.Rproj
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md R/CEdecisiontree_Rcpp.R R/RcppExports.R R/assertions.R R/branch_joint_probs.R R/child_list_to_transmat.R R/create_ce_tree_df.R R/create_ce_tree_long_df.R R/create_psa_inputs.R R/data.R R/dectree.R R/dectree_expected_default.R R/dectree_expected_recursive.R R/dectree_expected_recursive2.R R/dectree_expected_values_C.R R/dectree_expected_values_S3.R R/define_model.R R/fill_complementary_probs.R R/insert_to_transmat.R R/long_xx_transmat.R R/match_branch_to_label.R R/match_branchlabel_to_prob.R R/new_xxx.R R/run_cedectree.R R/sample_distributions.R R/terminal_pop.R R/trans_binarytree.R R/transmat_to_child_list.R R/validate_.R README.Rmd README.md
_pkgdown.yml
codecov.yml
data-raw/LTBI-decision-tree-probs_full.csv
data-raw/LTBI-decision-tree-probs_full.xlsx
data-raw/LTBI_decision-tree-costs-full.csv
data-raw/LTBI_decision-tree-costs-full.xlsx
data-raw/README_decisiontree_silverdecisions.json
data-raw/bcg-costs.csv
data-raw/bcg-probs.csv
data-raw/bcg-utility.csv
data-raw/decision-tree-costs.csv
data-raw/decision-tree-probs.csv
data-raw/label-branch table.csv
data-raw/label-distn table.csv
data-raw/label-val table.csv
data/bcg_cost.RData
data/bcg_probs.RData
data/bcg_utility.RData
data/cost.RData
data/probs.RData
docs/404.html
docs/CODE_OF_CONDUCT.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/README.knit.html
docs/README.utf8.html
docs/articles/Using_function_dispatch.html
docs/articles/Using_function_dispatch_files/anchor-sections-1.0/anchor-sections.css
docs/articles/Using_function_dispatch_files/anchor-sections-1.0/anchor-sections.js
docs/articles/Using_function_dispatch_files/header-attrs-2.5/header-attrs.js
docs/articles/build_tree.html
docs/articles/build_tree_files/anchor-sections-1.0/anchor-sections.css
docs/articles/build_tree_files/anchor-sections-1.0/anchor-sections.js
docs/articles/build_tree_files/header-attrs-2.5/header-attrs.js
docs/articles/ce_analysis.html
docs/articles/comparison-with-other-packages.html
docs/articles/comparison-with-other-packages_files/anchor-sections-1.0/anchor-sections.css
docs/articles/comparison-with-other-packages_files/anchor-sections-1.0/anchor-sections.js
docs/articles/comparison-with-other-packages_files/header-attrs-2.5/header-attrs.js
docs/articles/index.html
docs/articles/other-input-formats.html
docs/articles/other-input-formats_files/anchor-sections-1.0/anchor-sections.css
docs/articles/other-input-formats_files/anchor-sections-1.0/anchor-sections.js
docs/articles/other-input-formats_files/header-attrs-2.5/header-attrs.js
docs/articles/probabilistic-sensitivity-analysis.html
docs/articles/probabilistic-sensitivity-analysis_files/figure-html/unnamed-chunk-5-1.png
docs/articles/probability-sensitivity-analysis (1).html
docs/articles/probability-sensitivity-analysis.html
docs/articles/probability-sensitivity-analysis_files/anchor-sections-1.0/anchor-sections.css
docs/articles/probability-sensitivity-analysis_files/anchor-sections-1.0/anchor-sections.js
docs/articles/probability-sensitivity-analysis_files/figure-html/unnamed-chunk-5-1 (1).png
docs/articles/probability-sensitivity-analysis_files/figure-html/unnamed-chunk-5-1.png
docs/articles/probability-sensitivity-analysis_files/header-attrs-2.5/header-attrs.js
docs/articles/quickstart.html
docs/articles/scenario-sensitivity-analysis.html
docs/articles/scenario-sensitivity-analysis_files/anchor-sections-1.0/anchor-sections.css
docs/articles/scenario-sensitivity-analysis_files/anchor-sections-1.0/anchor-sections.js
docs/articles/scenario-sensitivity-analysis_files/figure-html/unnamed-chunk-7-1.png
docs/articles/scenario-sensitivity-analysis_files/header-attrs-2.5/header-attrs.js
docs/articles/simple_example.html
docs/articles/simple_example_files/figure-html/unnamed-chunk-1-1.png
docs/articles/simple_example_files/figure-html/unnamed-chunk-1-2.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/deps/bootstrap-5.1.3/bootstrap.bundle.min.js
docs/deps/bootstrap-5.1.3/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.1.3/bootstrap.min.css
docs/deps/data-deps.txt
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/CEdecisiontree_recursive.html
docs/reference/Cdectree_expected_values.html
docs/reference/Rplot001.png
docs/reference/bcg_cost.html
docs/reference/bcg_probs.html
docs/reference/bcg_utility.html
docs/reference/branch_joint_probs.dat_long.html
docs/reference/branch_joint_probs.html
docs/reference/branch_joint_probs.transmat.html
docs/reference/child_list_to_transmat.html
docs/reference/cost.html
docs/reference/create_ce_tree_df.html
docs/reference/create_ce_tree_long_df.html
docs/reference/create_psa_inputs.html
docs/reference/dectree.html
docs/reference/dectree_expected_default.html
docs/reference/dectree_expected_recursive.html
docs/reference/dectree_expected_recursive2.html
docs/reference/dectree_expected_values.dat_long.html
docs/reference/dectree_expected_values.default.html
docs/reference/dectree_expected_values.html
docs/reference/dectree_expected_values.transmat.html
docs/reference/dectree_expected_values.tree_dat.html
docs/reference/define_model.html
docs/reference/figures/README-pressure-1.png
docs/reference/figures/README_decisiontree_silverdecisions.png
docs/reference/figures/hexbadge.png
docs/reference/figures/hexbadge.pptx
docs/reference/figures/hexbadge.svg
docs/reference/figures/hexbadge2.png
docs/reference/figures/imgfile.png
docs/reference/figures/tree.png
docs/reference/fill_complementary_probs.html
docs/reference/get_children_list.html
docs/reference/index.html
docs/reference/insert_to_transmat.html
docs/reference/is_prob_matrix.html
docs/reference/long_to_transmat.html
docs/reference/match_branch_to_label.html
docs/reference/match_branchlabel_to_prob.html
docs/reference/new_dat_long.html
docs/reference/new_models.html
docs/reference/new_transmat.html
docs/reference/new_tree_dat.html
docs/reference/pipe.html
docs/reference/probs.html
docs/reference/run_cedectree.html
docs/reference/terminal_pop.html
docs/reference/trans_binarytree.html
docs/reference/transmat_to_child_list.html
docs/reference/transmat_to_long.html
docs/reference/validation.html
docs/search.json
docs/sitemap.xml
man-roxygen/args-dat_long.R man-roxygen/args-transmat.R man-roxygen/args-tree_dat.R man/Cdectree_expected_values.Rd man/MoM_beta.Rd man/MoM_gamma.Rd man/bcg_cost.Rd man/bcg_probs.Rd man/bcg_utility.Rd man/branch_joint_probs.Rd man/child_list_to_transmat.Rd man/cost.Rd man/create_ce_tree_df.Rd man/create_ce_tree_long_df.Rd man/create_psa_inputs.Rd man/dectree.Rd man/dectree_expected_default.Rd man/dectree_expected_recursive.Rd man/dectree_expected_recursive2.Rd man/dectree_expected_values.Rd man/define_model.Rd
man/figures/README_decisiontree_silverdecisions.png
man/figures/hexbadge.png
man/figures/hexbadge.pptx
man/figures/hexbadge.svg
man/figures/hexbadge2.png
man/figures/imgfile.png
man/figures/tree.png
man/fill_complementary_probs.Rd man/get_sd_from_normalCI.Rd man/insert_to_transmat.Rd man/is_prob_matrix.Rd man/long_to_transmat.Rd man/match_branch_to_label.Rd man/match_branchlabel_to_prob.Rd man/new_models.Rd man/probs.Rd man/rpert.Rd man/run_cedectree.Rd man/sample_distributions.Rd man/terminal_pop.Rd man/trans_binarytree.Rd man/transmat_to_child_list.Rd man/transmat_to_long.Rd man/validation.Rd scripts/bcg-calc.R scripts/decision-tree-calc.R scripts/make_hexbadge.R
src/.gitignore
src/RcppExports.cpp
src/dectree_expected_val.cpp
tests/testthat.R tests/testthat/test-branch_joint_probs.R tests/testthat/test-cedecisiontree_recursive.R tests/testthat/test-dectree_expected_values.R tests/testthat/test-define_model.R tests/testthat/test-long_to_transmat.R
vignettes/.gitignore
vignettes/Using_function_dispatch.Rmd
vignettes/bibliography.bib
vignettes/build_tree.Rmd vignettes/ce_analysis.Rmd vignettes/comparison-with-other-packages.Rmd vignettes/other-input-formats.Rmd vignettes/probability-sensitivity-analysis.Rmd vignettes/quickstart.Rmd vignettes/scenario-sensitivity-analysis.Rmd
n8thangreen/CEdecisiontree documentation built on Sept. 13, 2022, 5:25 a.m.