Files in n8thangreen/STIecoPredict
Multilevel Regression With Post-Stratification Using Natsal Data

.Rbuildignore

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.Rproj.user/F42C56F5/build_options

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.gitignore

DESCRIPTION

NAMESPACE

R/Convert2Groups.R R/DATA_covariates-man.R R/DATA_surveillance-man.R R/calcTotalProbs.R R/classifier_fns.R R/classpredict.R R/covariate-shift-fns.R R/data-cleaning.R R/intervention_comparisons.R R/joinAllOutcomeData.R R/knn-fns.R R/locallevel_pop_props.R R/locallevel_pop_props_class-TODO-.R R/locallevel_pop_sim.R R/maps_fns.R README.Rmd README.md

STIecoPredict.Rproj

archive/coda1.txt

archive/coda2.txt

archive/coda3.txt

archive/codaIndex.txt

archive/data.txt

archive/inits1.txt

archive/inits2.txt

archive/inits3.txt

archive/log.odc

archive/log.txt

archive/model.txt

archive/script.txt

data/.gitignore

data/CTADGUM_age1524_2012.RData

data/CTADGUM_age1524_2013.RData

data/CTADGUM_age1524_2014.RData

data/CTADGUM_dat2011.RData

data/CTADGUM_dat2012.RData

data/LA_IMD.RData

data/LA_classification.RData

data/LA_ethnic2.RData

data/LA_ethnic2_london.RData

data/NCSP_NNNG_GUM_age1524_2011.RData

data/Natsal-3_extract_2April2014.RData - Shortcut.lnk

data/ONS_LA_population_2011.RData

data/houseprice_earnings.RData

data/joint_covariates_input_data.RData

data/laregionlookup2013.RData

data/locallevel_pop_props_output.RData

data/maps/LAD_2011_GB_BGC_metadata.xml

data/maps/LAD_DEC_2011_GB_BGC.dbf

data/maps/LAD_DEC_2011_GB_BGC.prj

data/maps/LAD_DEC_2011_GB_BGC.sbn

data/maps/LAD_DEC_2011_GB_BGC.sbx

data/maps/LAD_DEC_2011_GB_BGC.shp.xml

data/maps/LAD_DEC_2011_GB_BGC.shx

data/maps/LondonBoroughs.dbf

data/maps/LondonBoroughs.shp

data/maps/LondonBoroughs.shx

data/maps/england_lad_2011-Neighbour-list-in-BUGS-format.txt

data/maps/england_lad_2011.dbf

data/maps/england_lad_2011.prj

data/maps/england_lad_2011.shx

data/maps/london-borough-profiles-2014.csv

data/maps/london_sport.dbf

data/maps/london_sport.prj

data/maps/london_sport.sbn

data/maps/london_sport.sbx

data/maps/london_sport.shp

data/maps/london_sport.shx

data/maps/ukbord.dbf

data/maps/ukbord.prj

data/maps/ukbord.shp

data/maps/ukbord.shx

data/popCensus.RData

data/sim_prop.RData

data/sin2_LA.RData

data/sin2_household.RData

inst/extdata/2014_annual_CTAD_Data_tables_for_publication_Version1.1-1.xls

inst/extdata/CT0122 - Age by ethnic group by sex.xlsx

inst/extdata/LA-householdfamilies-KS105EW.csv

inst/extdata/LA-householdsizes-QS406EW.csv

inst/extdata/LA-testing-activity-Q1-4-2011_12.xls

inst/extdata/LAcode LAname OAC2011sub SIN2 10May2016.dta

inst/extdata/UKDA-7799-tab/7799_file_information.rtf

inst/extdata/UKDA-7799-tab/mrdoc/UKDA/UKDA_Study_7799_Information.htm

inst/extdata/UKDA-7799-tab/mrdoc/allissue/eul_natsal_2010_for_archive_ukda_data_dictionary.rtf

inst/extdata/UKDA-7799-tab/mrdoc/pdf/7799_natsal_3_questionnaire.pdf inst/extdata/UKDA-7799-tab/mrdoc/pdf/7799_natsal_3_user_note.pdf

inst/extdata/UKDA-7799-tab/read7799.htm

inst/extdata/census2011_LA_ethgrp_agegrp_sex.csv

inst/extdata/conceptionstatisticstablesfinal_tcm77-258342.xls

inst/extdata/figure2_tcm77-388543.xls

inst/extdata/laregionlookup2013_tcm77-368312.xls

inst/extdata/r21ewrttableks201ewladv1_tcm77-290595.xls

inst/extdata/sin2-householdsize_22June2016.dta

man/CTADGUM.dat2011.Rd man/CTADGUM.dat2012.Rd man/CTADGUM.dat2013.Rd man/DistnTable.Rd man/IMD.dat2010.Rd man/LAnameClean.Rd man/SimInputPropData.Rd man/aggregate_indiv_categories.Rd man/area_adjusted_agesex_probs.Rd man/calcStats.CTADGUM_pred.Rd man/calcStats.CTADGUM_pred_knnlog.Rd man/calcTotalProbs.Rd man/changeToArrayIndiv.Rd man/classPredict.Rd man/cleanDummyNames.Rd man/colNameReplace.Rd man/convert2Groups.Rd man/convertAge2ageGroup.Rd man/convertAge2ageGroup2.Rd man/convertIncome2incomeGroup.Rd man/covariateShift.Rd man/covariateShift.glm.Rd man/covariateShift_glm.Rd man/failknn.Rd man/fillEmpty.Rd man/fitModel.Rd man/houseprice_earnings.dat.Rd man/joinAllOutcomeData.Rd man/knnDatamatrix.Rd man/levelsMatch.Rd man/locallevel_pop_props.Rd man/locallevel_pop_props.class.Rd man/locallevel_pop_sim.Rd man/map.tb.Rd man/multimap.Rd man/popLA.Rd man/predict.lgstc.Rd man/predictKNN.Rd man/rss.Rd man/scaleknn.Rd man/scatterplotObsEst.Rd man/toupper.fac.Rd

model.txt

raw-data/Adultssmoking.csv

raw-data/Adultssmoking_LA.csv

raw-data/CT0122 - Age by ethnic group by sex-London.csv

raw-data/CT0122 - Age by ethnic group female-London.csv

raw-data/CT0122 - Age by ethnic group male-London.csv

raw-data/CTADGUM_age1524_2012.csv

raw-data/CTADGUM_age1524_2013.csv

raw-data/CTADGUM_age1524_2014.csv

raw-data/CTADGUM_age1634_2012.csv

raw-data/Drugmisuse.csv

raw-data/Increasingandhigherriskdrinking_LA.csv

raw-data/LA_IMD.csv

raw-data/LA_classification.csv

raw-data/LA_codes.csv

raw-data/LA_ethnic2.csv

raw-data/LA_individual_ages_popn_2012_both.csv

raw-data/LA_individual_ages_popn_2012_female.csv

raw-data/LA_individual_ages_popn_2012_male.csv

raw-data/LA_individual_ages_prop1644_2012_both.csv

raw-data/LA_individual_ages_prop1644_2012_female.csv

raw-data/LA_individual_ages_prop1644_2012_male.csv

raw-data/LA_individual_ages_prop_2012_both.csv

raw-data/MostdeprivedquintileCSV.csv

raw-data/NCSP-NNNG-GUM_age1524_2011.csv

raw-data/NCSP-NNNG-GUM_age1624_2011.csv

raw-data/ONS_LA_population_2011.csv

raw-data/census2011_LA-sex-age-studentnums.csv

raw-data/census2011_LA_ethgrp_agegrp_female.csv

raw-data/census2011_LA_ethgrp_agegrp_male.csv

raw-data/conception-under18.csv

raw-data/drinking_units.csv

raw-data/householdsize_LA.csv

raw-data/houseprice_earnings.csv

raw-data/la_ethgrp_pop.csv

raw-data/livealone_agesex.csv

raw-data/lookup_LA_to_PCT_2012.csv

raw-data/lookup_gor_UA_LA.csv

raw-data/nhs_pct.kml

raw-data/perc_smoking_agegrp.csv

raw-data/popCensus_agegrp_LA.csv

raw-data/smoking_LA.csv

raw-data/smoking_agegrp.csv

raw-data/smoking_prevalence_IHS.csv

raw-data/studentCensus.csv

raw-data/survey-indiv-LA-codes.csv

scripts/Natsal-data-plots/Natsal-data-plots.R

scripts/Natsal-data-plots/Natsal-data-plots.docx

scripts/Natsal-data-plots/Natsal-data-plots.pdf

scripts/WinBUGS/README.txt

scripts/WinBUGS/WinBUGS-2step-regn/WinBUGS_prob-cttestly_given_ever-had-sex.R scripts/WinBUGS/WinBUGS-2step-regn/WinBUGS_prob-ever-had-sex.R

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/MCMCoutput.RData

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/WinBUGS_with-CAR.R scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/car-only.R

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/coda1.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/coda2.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/coda3.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/codaIndex.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/data.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/inits1.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/inits2.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/inits3.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/log.odc

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/log.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/model.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/odc22900

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-CAR/script.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/WinBUGS_with-all_LA-vars.R

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/coda1.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/coda2.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/coda3.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/codaIndex.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/data.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/inits1.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/inits2.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/inits3.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/log.odc

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/log.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/model.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/odc22900

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-all_LA-vars/script.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/MCMCoutput.RData

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/WinBUGS_MAIN-no-place-effects.R

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/coda1.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/coda2.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/coda3.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/codaIndex.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/data.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/inits1.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/inits2.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/inits3.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/log.odc

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/log.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/model.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/outmat.RData

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/script.txt

scripts/WinBUGS/WinBUGS_MAIN/WinBUGS_MAIN-no-place-effects/untitled.odc

scripts/WinBUGS/WinBUGS_MAIN/plots/MRP-surveill-scatterplot.png

scripts/WinBUGS/WinBUGS_MAIN/plots/directNatsal-surveill-scatterplot.png

scripts/WinBUGS/WinBUGS_MAIN/plots/posterior_catepillar_plot - with LA - la.png

scripts/WinBUGS/WinBUGS_MAIN/plots/posterior_catepillar_plot - without LA.png

scripts/WinBUGS/WinBUGS_MAIN/plots/surveill-MRP-errorplot.png

scripts/WinBUGS/WinBUGS_MAIN/plots/surveill-MRP-outlier-errorplot.png

scripts/WinBUGS/_archive/WinBUGS_basicmodel/R2WinBUGS.R scripts/WinBUGS/_archive/WinBUGS_basicmodel/WinBUGS_basicmodel.R

scripts/WinBUGS/_archive/WinBUGS_basicmodel/coda1.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/coda2.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/coda3.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/codaIndex.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/data.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/inits1.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/inits2.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/inits3.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/log.odc

scripts/WinBUGS/_archive/WinBUGS_basicmodel/log.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/model.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/odc00047

scripts/WinBUGS/_archive/WinBUGS_basicmodel/odc03039

scripts/WinBUGS/_archive/WinBUGS_basicmodel/odc04365

scripts/WinBUGS/_archive/WinBUGS_basicmodel/odc15377

scripts/WinBUGS/_archive/WinBUGS_basicmodel/odc44393

scripts/WinBUGS/_archive/WinBUGS_basicmodel/outmat.RData

scripts/WinBUGS/_archive/WinBUGS_basicmodel/script.txt

scripts/WinBUGS/_archive/WinBUGS_basicmodel/temp.R scripts/WinBUGS/_archive/WinBUGS_with-CAR.R scripts/WinBUGS/_archive/WinBUGS_with-LA+gor/WinBUGS_with-LA+gor.R scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/WinBUGS_with-LA-no-ONS.R

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/MCMCoutput.RData

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/coda1 (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/coda2 (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/coda3 (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/codaIndex (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/data (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/inits1 (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/inits2 (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/inits3 (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/log (2).odc

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/log (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/model (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/archive/script (2).txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/coda1.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/coda2.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/coda3.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/codaIndex.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/data.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/inits1.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/inits2.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/inits3.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/log.odc

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/log.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/model.txt

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/outmat.RData

scripts/WinBUGS/_archive/WinBUGS_with_LA_no_ONS/script.txt

scripts/WinBUGS/create-adjacency-matrix.R

scripts/WinBUGS/temp_WinBUGS_output/MCMCoutput.RData

scripts/WinBUGS/temp_WinBUGS_output/coda1.txt

scripts/WinBUGS/temp_WinBUGS_output/coda2.txt

scripts/WinBUGS/temp_WinBUGS_output/coda3.txt

scripts/WinBUGS/temp_WinBUGS_output/codaIndex.txt

scripts/WinBUGS/temp_WinBUGS_output/data.txt

scripts/WinBUGS/temp_WinBUGS_output/england_lad_2011-Neighbour-list-in-BUGS-format.txt

scripts/WinBUGS/temp_WinBUGS_output/inits1.txt

scripts/WinBUGS/temp_WinBUGS_output/inits2.txt

scripts/WinBUGS/temp_WinBUGS_output/inits3.txt

scripts/WinBUGS/temp_WinBUGS_output/log.odc

scripts/WinBUGS/temp_WinBUGS_output/log.txt

scripts/WinBUGS/temp_WinBUGS_output/model.txt

scripts/WinBUGS/temp_WinBUGS_output/odc18061

scripts/WinBUGS/temp_WinBUGS_output/odc23586

scripts/WinBUGS/temp_WinBUGS_output/odc60821

scripts/WinBUGS/temp_WinBUGS_output/odc74876

scripts/WinBUGS/temp_WinBUGS_output/script.txt

scripts/ecoreg/ecoreg_chlamydia.R scripts/ecoreg/ecoreg_exercises.R

scripts/mrp/README.txt

scripts/mrp/archive/cleaned-regn-input-mrpNatsal0.RData

scripts/mrp/archive/explicit-model-fit-agesex.R scripts/mrp/archive/explicit-mrp-Natsal-MAIN-with-LA (fi--dide102's conflicted copy 2016-05-23).Rmd scripts/mrp/archive/explicit-mrp-Natsal-MAIN-with-LA-WinBUGS.Rmd scripts/mrp/archive/explicit-mrp-Natsal-MAIN-with-LAs-in-London-only.Rmd scripts/mrp/archive/explicit-mrp-Natsal-MAIN.Rmd

scripts/mrp/archive/explicit-mrp-Natsal-full-MODELCHOICE.docx

scripts/mrp/archive/explicit-mrp-Natsal-full.Rmd scripts/mrp/archive/mrp-for-range-of-regns.R scripts/mrp/archive/mrp_package-Natsal-for-range-of-regns.R scripts/mrp/archive/mrp_package-vignette.R scripts/mrp/archive/mrp_package-vignette.pdf scripts/mrp/compare-blmer-and-WinBUGS.R

scripts/mrp/data/CTADGUM_pred-WinBUGS.RData

scripts/mrp/data/CTADGUM_pred-with-LA.RData

scripts/mrp/data/CTADGUM_pred.RData

scripts/mrp/data/England_LA_adjacency_matrix.csv

scripts/mrp/data/GUMclinic_LAs.csv

scripts/mrp/data/Natsal-3_extract_2April2014.RData - Shortcut.lnk

scripts/mrp/data/adjacency_matrix-list.RData

scripts/mrp/data/adjacency_matrix_england-list.RData

scripts/mrp/data/anova_table.csv

scripts/mrp/data/anova_table.xlsx

scripts/mrp/data/anova_without_regions.csv

scripts/mrp/data/archive/cleaned-regn-input-mrpNatsal.RData

scripts/mrp/data/cleaned-regn-input-mrpNatsal.RData

scripts/mrp/data/la-region-plot-lookup (2).csv

scripts/mrp/data/la-region-plot-lookup.csv

scripts/mrp/data/laregionlookup2013.RData

scripts/mrp/data/mrp-data-man.R

scripts/mrp/data/outmat.RData

scripts/mrp/data/postcode_LA_lookup.RData

scripts/mrp/data/predictions.RData

scripts/mrp/data/raw-data-mrpNatsal.RData

scripts/mrp/data/sim_prop.RData

scripts/mrp/my-mrp-Natsal-prep-data.R

scripts/mrp/output-docs_&_plots/choropleth-maps.docx

scripts/mrp/output-docs_&_plots/explicit-mrp-Natsal-full.docx

scripts/mrp/output-docs_&_plots/plots/EDA/LA-level-covariate_NCSP-scatterplots.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs-surveill_no-place-effects.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs-surveill_no-place-effects_Regions-grid_numbered.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs-surveill_no-place-effects_surveill-years-grid_numbered.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs-surveill_with-LA_Regions-grid_numbered-lmer.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs-surveill_with-LA_Regions-grid_numbered.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs-surveill_with-LA_surveill-years-grid_numbered-lmer.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs-surveill_with-LA_surveill-years-grid_numbered.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs_surveill_GUM-solid.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs_surveill_nonGUM-solid.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs_surveill_with-LA-error.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs_surveill_with-LA-numbers.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs_surveill_with-LA-points.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs_surveill_with-LA-points_lines.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs_surveill_with-LA-solid.png

scripts/mrp/output-docs_&_plots/plots/EDA/MRP-vs_surveill_with-LA.png

scripts/mrp/output-docs_&_plots/plots/EDA/Natsal-vs-mrp_bars.png

scripts/mrp/output-docs_&_plots/plots/EDA/blmer-vs-WinBUGS_mrp-NCSP-numbered.png

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scripts/mrp/output-docs_&_plots/plots/EDA/direct-vs-MRP_no-place-effects.png

scripts/mrp/output-docs_&_plots/plots/EDA/direct-vs-MRP_with-LA.png

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scripts/mrp/output-docs_&_plots/plots/EDA/map-mrp-LONDON.png

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scripts/mrp/output-docs_&_plots/plots/EDA/map-posterior-prob-greater-than-surveillance-England&London.png

scripts/mrp/output-docs_&_plots/plots/EDA/map-posterior-prob-greater-than-surveillance-LONDON.png

scripts/mrp/output-docs_&_plots/plots/EDA/map-posterior-prob-greater-than-surveillance.png

scripts/mrp/output-docs_&_plots/plots/EDA/map_mean-NCSP2011_England&London.png

scripts/mrp/output-docs_&_plots/plots/EDA/map_mean-NCSP2012_England&London.png

scripts/mrp/output-docs_&_plots/plots/EDA/mrp-vs-surveill-WinBUGS-50CI.png

scripts/mrp/output-docs_&_plots/plots/EDA/mrp-vs-surveill-WinBUGS-95CI.png

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scripts/mrp/output-docs_&_plots/plots/EDA/natsal-vs-mrp_bubbles.png

scripts/mrp/output-docs_&_plots/plots/EDA/posterior_catepillar_plot - with LA - age.png

scripts/mrp/output-docs_&_plots/plots/EDA/posterior_catepillar_plot - with LA - demographics.png

scripts/mrp/output-docs_&_plots/plots/EDA/posterior_catepillar_plot - with LA - la.png

scripts/mrp/output-docs_&_plots/plots/EDA/posterior_catepillar_plot - without LA.png

scripts/mrp/output-docs_&_plots/plots/EDA/pred_vs_obs.png

scripts/mrp/output-docs_&_plots/plots/EDA/surveill-vs-surveill.png

scripts/mrp/output-docs_&_plots/plots/EDA/tornado-plots_age.png

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scripts/mrp/output-docs_&_plots/plots/EDA/tornado-plots_metUA.png

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scripts/mrp/output-docs_&_plots/plots/for publication/choropleth-map.jpg

scripts/mrp/output-docs_&_plots/plots/for publication/forest-plot_metUA-LA.jpeg

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scripts/mrp/output-docs_&_plots/plots/for publication/tornado-plot-demographics.jpg

scripts/mrp/output-docs_&_plots/plots/for publication/tornado-plot-metUA.jpg

scripts/mrp/output-docs_&_plots/regression-fits.docx

scripts/stan/Natsal-multilevel-regn.stan

scripts/stan/Natsal-multistate-logistic-data.RData

tests/tests-locallevel_pop_props-ethnic2.R tests/tests-locallevel_pop_props.R vignettes/MAPS_estimated_vs_data.Rmd vignettes/Natsal_data_config.Rmd vignettes/PLOTS_estimated_vs_data_NEW.R vignettes/PLOTS_riskfactor_regn.R vignettes/archive/example-vignette.R vignettes/archive/example-vignette.Rmd

vignettes/archive/example-vignette.html

vignettes/archive/sim_data_config.R vignettes/locallevel_classifier_WORKFLOW.Rmd vignettes/model_fitting.Rmd vignettes/sim_data_config.Rmd vignettes/sim_synthetic_pop.Rmd

vignettes/sim_synthetic_pop.html

n8thangreen/STIecoPredict documentation built on June 7, 2020, 12:50 p.m.

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Multilevel Regression With Post-Stratification Using Natsal Data

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