i-sense aims to identify outbreaks of infectious disease much earlier than ever before, helping patients gain faster access to care and protecting populations. Funded by the EPSRC, i-sense is an Interdisciplinary Research Collaboration (IRC) dedicated to supporting a strong team of professionals with different expertise and experience.
The key steps of the analysis pipeline are:
Tidy data to same levels, dates etc
Tidy, arrange and calc numbers and probs of individuals
Calculate population counts for each scenario
Calculate transition matrix for each scenario
Calculate cost-effectiveness for each scenario
The final report is here. Presentation slides are here and here.
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