Files in n8thangreen/ltbiScreenLite
ltbiScreenLite

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/activetb_qaly_cost.R R/asserts.R R/calc_QALY_tb.R R/combine_popmod_dectree_res.R R/costeff_stats.R R/create_and_save_policies.R R/create_and_save_scenarios.R R/decision_tree_cluster.R R/diroutput.R R/expected_cost_QALY.R R/handle_try_error.R R/interv_constructor.R R/list_to_BCEA.R R/make_ce.R R/make_incremental_ce.R R/misc.R R/myToDataFrame_fns.R R/parallel_decision_tree.R R/policy_cohort.R R/policy_interv.R R/prep_cost-eff_constructors.R R/rows_first_n_ids.R R/run_final_message.R R/run_model.R R/run_policy.R R/sample_subset_pop_dectree.R R/save_session_info.R R/scenario_QALY.R R/scenario_QALYloss.R R/scenario_cost.R R/screen_discount.R R/screened_cohort_cost.R R/set_branch_uniform_params.R R/setup_folders.R R/subset_pop_dectree.R
data/051206 - IMPUTED_sample.RData
data/LTBI_dectree-QALY.yaml
data/LTBI_dectree-cost.yaml
data/cost_effectiveness_params.RData
data/global_params.RData
data/intervention_constants.RData
data/model_input_cohort.RData
data/osNode_cost_2009.RData
data/osNode_cost_2009.Rds
data/osNode_health_2009.RData
data/osNode_health_2009.Rds
data/policies-inputs.csv
data/policies.RData
data/policies_ls.RData
data/scenario-parameter-values_1.xlsx
data/scenario_params.RData
data/scenario_params_df.csv
data/synthetic_cohort_params.RData
data/unit_costs.RData
ltbiScreenLite.Rproj
ltbiScreenLite_0.1.0.pdf man/activetb_qaly_cost.Rd man/branch_unif_params.Rd man/calc_QALY_tb.Rd man/ce_default.Rd man/combine_popmod_dectree_res.Rd man/costeff_stats.Rd man/cp_in_data_to_out_dir.Rd man/create_and_save_policies.Rd man/create_and_save_scenarios.Rd man/decision_tree_cluster.Rd man/diroutput.Rd man/expected_cost_QALY.Rd man/filter_cohort_by_policy.Rd man/handle_try_error.Rd man/interv_constructor.Rd man/list_to_BCEA.Rd man/make_ce0.Rd man/make_ce1.Rd man/make_incremental_ce.Rd man/mean_QALYs.Rd man/my_ToDataFrameTable.Rd man/my_ToDataFrameTypeCol.Rd man/notif_cost.Rd man/parallel_decision_tree.Rd man/rcontact_tracing_costs.Rd man/rows_first_n_ids.Rd man/rsample_n_ids.Rd man/run_final_message.Rd man/run_model.Rd man/run_policy.Rd man/sample_avoid_lg.Rd man/sample_subset_pop_dectree.Rd man/save_session_info.Rd man/scenario_QALY.Rd man/scenario_QALYloss.Rd man/scenario_cost.Rd man/screen_discount.Rd man/screened_cohort_cost.Rd man/set_branch_uniform_params.Rd man/set_policy.Rd man/setup_folders.Rd man/subset_pop_dectree.Rd man/test.Rd man/total_contact_tracing_cost.Rd
output/data/policies-inputs.csv
output/data/policy_001/ce_res.RData
output/data/policy_001/cohort.RData
output/data/policy_001/dectree_res.RData
output/data/policy_001/e_and_c_totals.RData
output/data/policy_001/folders.RData
output/data/policy_001/intervention_constants.RData
output/data/policy_001/popmod_res.RData
output/data/scenario_params_df.csv
output/messages.Rout
scripts/000-programme-level-params-scenario-runner.R scripts/data-prep_constants-policy.R scripts/data-prep_cost-effectiveness.R scripts/data-prep_modelling.R scripts/data-prep_scenario.R scripts/plot-basic-ce-plane.R scripts/prep-decisiontree.R
session_info.txt
vignettes/pseudo-code.Rmd
vignettes/pseudo-code.html
vignettes/pseudo-code.md vignettes/pseudo-code.pdf vignettes/running-full-model.Rmd vignettes/running-full-model.pdf
n8thangreen/ltbiScreenLite documentation built on May 7, 2019, 9:22 p.m.