getBestThresholds: Grab best thresholds per feature from ROC curve
In naomiwilson/nariel: Naive Bayes Classifier for scoring human microbiomes
getBestThresholds R Documentation
Grab best thresholds per feature from ROC curve
Description
Grab best thresholds per feature from ROC curve
Usage
getBestThresholds(
sample_data,
perform_NBC_output,
train_NBC_output,
featureAUCsRanked,
idx1,
idx2
)
Arguments
sample_data
character matrix: column 1 = sample names; column 2 = class labels (e.g. "asthmatic" and "healthy")
perform_NBC_output
entire output from perform_NBC
train_NBC_output
entire output from train_NBC
featureAUCsRanked
vector of AUCs in rank order
idx1
starting rank for resulting list
idx2
ending rank for resulting list
naomiwilson/nariel documentation built on March 1, 2023, 12:51 p.m.
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| getBestThresholds | R Documentation |
Grab best thresholds per feature from ROC curve
Description
Grab best thresholds per feature from ROC curve
Usage
getBestThresholds( sample_data, perform_NBC_output, train_NBC_output, featureAUCsRanked, idx1, idx2 )
Arguments
sample_data |
character matrix: column 1 = sample names; column 2 = class labels (e.g. "asthmatic" and "healthy") |
perform_NBC_output |
entire output from perform_NBC |
train_NBC_output |
entire output from train_NBC |
featureAUCsRanked |
vector of AUCs in rank order |
idx1 |
starting rank for resulting list |
idx2 |
ending rank for resulting list |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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