duplet_reduction: Compilation of a non-redundant dataset based on duplets

Description Usage Arguments Value Examples

View source: R/duplet_reduction.R

Description

This function takes the data frame, duplet labels, experimental DDG values, and the mutations' biochemical features. With this function, the dataset can be filtered based on duplets, secondary structure, and relative ASA of the mutations.

Usage

1
duplet_reduction(data, duplets, DDG, SS = NULL, ASA = NULL)

Arguments

data

A redundant dataset of mutations

duplets

Column name of Duplets

DDG

Column name of Experimental DDG values

SS

Default is Null. Specify the column name that contains secondary structure information

ASA

Default is Null. Specify the column name that contains relative ASA information

Value

A list of reduced dataset and a box plot

Examples

1
2
duplet_reduction(data = df, duplets = "Duplets", DDG = "Experimental")
duplet_reduction(data = df, duplets = "Duplets", DDG = "Experimental", SS = "SStructure")

narodkebabci/gRoR documentation built on Jan. 18, 2022, 10:09 p.m.