diurnality_customTimes: Computes the diurnality index, using different start and end...

In nasserdr/digyRhythm: Analyzing Animal's Rhythmicity

Computes the diurnality index, using different start and end definitions for each day and night, based on an activity dataframe

Description

Computes the diurnality index, using different start and end definitions for each day and night, based on an activity dataframe

Usage

diurnality_customTimes(data, activity, timedata, save = NULL)

Arguments

data	a digiRhythm-friendly dataset
activity	The number of non-useful lines to skip (lines to header)
timedata	a dataset, including 4 columns of POSIXct format, including date and time "day_start", "day_end", "night_start", "night_end"
save	if NULL, the image is not saved. Otherwise, this parameter will be the name of the saved image. it should contain the path and name without the extension.

Value

A ggplot2 object that contains the Sliding diurnality plot in addition to a dataframe with 2 col: date and sliding diurnality index

Examples

data("df516b_2", package = "digiRhythm")
data <- df516b_2
data <- remove_activity_outliers(data)
activity <- names(data)[2]
data("timedata", package = "digiRhythm")
timedata <- timedata
d_index <- diurnality_customTimes(data, activity, timedata)

nasserdr/digyRhythm documentation built on April 17, 2025, 8:41 p.m.