VNCIS1: Template information and surface model for the VNCIS1...

In natverse/nat.flybrains: Additional data for use with the NeuroAnatomy Toolbox (nat)

Template information and surface model for the VNCIS1 reference neuropil

Description

The VNCIS1 template is a shape-averaged, intersex template containing the D. melanogaster adult ventral nerve cord (more properly the thoracico-abdominal ganglion) generated using the CMTK avg_adm tool.

Usage

VNCIS1

Format

An object of class templatebrain of dimension 1024 x 768 x 163.

References

Cachero S., Ostrovsky A.D., Yu J.Y., Dickson B.J., and Jefferis G.S.X.E. (2010). Sexual dimorphism in the fly brain. Curr Biol 20 (18), 1589-601. doi:10.1016/j.cub.2010.07.045

Examples

VNCIS1

# originally calculated thus:
## Not run: 
as.templatebrain(
  "/GD/projects/CommonNeuroanatomy/VNCIS1/VNCIS1.nrrd",
  type="Average", sex='Intersex',
  doi="http://doi.org/10.5281/zenodo.13884",
  description = "See http://dx.doi.org/10.1016/j.cub.2010.07.045 for details")

## End(Not run)
plot3d(VNCIS1.surf)
# slightly different display
plot3d(VNCIS1)

natverse/nat.flybrains documentation built on Aug. 19, 2022, 7:51 a.m.