consensusBaseatCpG: Computes the consensus for paired-end sequences where the two...

Description Usage Arguments Value Author(s)

Description

Computes the consensus for paired-end sequences at positions where the two ends overlap

Usage

1
consensusBaseatCpG(alignment)

Arguments

alignment

list containing a GAlignmentPairs metadata of the sequences and two data frames of sequences and base qualities

Value

Invisibly a list containing a GAlignmentPairs metadata of the sequences and two data frames of sequences and base qualities

Author(s)


David Brown
brownd7@mskcc.org


ndbrown6/EMseq documentation built on Jan. 20, 2021, 2:36 a.m.