bf_parse_show_info: Parse output from 'showinf'
In neuroconductor-devel-releases/bftools: BioFormats Tools

Description Usage Arguments Value Examples

View source: R/bf_parse_show_info.R

Parse output from showinf

1	bf_parse_show_info(file)

file

Output from showinf, a filename

A list of output

file = "~/Downloads/2017_08_03__0006.czi"
if (file.exists(file)) {
res = showinf(file = file)
parsed = bf_parse_show_info(res)
res = showinf(file = file, debug = TRUE)
parsed2 = bf_parse_show_info(res)
testthat::expect_equal(parsed2$core, parsed$core)
testthat::expect_equal(parsed2$`series #0`, parsed$`series #0`)
}