Description Usage Arguments Value Examples
View source: R/nv_atlas_region.R
Searches atlas for specified region and related synonyms. If no matches are found, it will search the NIF ontology recursively for children of the specified region that are found in the atlas. If no matches are found, it will search recursively for parents that are found in the atlas. Returns the corresponding to the X, Y and Z coordinates, respectively, of the matching voxels. Coordinates are in mm in MNI space.
1 2 3 4 5 6 7 8 | nv_atlas_region(
region,
collection_name,
atlas_name,
verbose = TRUE,
secure = TRUE,
...
)
|
region |
Region to search or query on |
collection_name |
Collection name of the atlas |
atlas_name |
Name of the atlas |
verbose |
print diagnostic messages |
secure |
passed to |
... |
additional options to pass to |
List of the result of the GET
call and
the content
1 2 3 4 5 | res = nv_atlas_region(
region = "middle frontal gyrus",
collection_name = "Harvard-Oxford cortical and subcortical structural atlases",
atlas_name = "HarvardOxford cort maxprob thr25 1mm")
head(res$content$voxels)
|
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