regularizeSimlr: Automatically produce regularization matrices for simlr

Description Usage Arguments Value Author(s) Examples

View source: R/multiscaleSVDxpts.R

Description

Automatically produce regularization matrices for simlr

Usage

1
regularizeSimlr(x, knn, fraction = 0.1, sigma)

Arguments

x

A list that contains the named matrices. Note: the optimization will likely perform much more smoothly if the input matrices are each scaled to zero mean unit variance e.g. by the scale function.

knn

A vector of knn values (integers, same length as matrices)

fraction

optional single scalar value to determine knn

sigma

optional sigma vector for regularization (same length as matrices)

Value

A list of regularization matrices.

Author(s)

BB Avants.

Examples

1
# see simlr examples

neuroconductor-devel/ANTsR documentation built on April 1, 2021, 1:02 p.m.