Files in neuroconductor-devel/gganatogram
Create Anatograms of Various Species
.Rbuildignore
.github/workflows/autoci.yml
.github/workflows/autoci_pkgdown.yml
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/cell_key.R
R/get_anatogram.R
R/gganatogram.R
R/global_declarations.R
R/hgFemale_key.R
R/hgMale_key.R
R/mmFemale_key.R
R/mmMale_key.R
R/other_key.R
README.md
README.rmd
appveyor.yml
cell/actin_filaments.png
cell/centrosome.png
cell/cytosol.png
cell/endoplasmic_reticulum.png
cell/endosomes.png
cell/focal_adhesion_sites.png
cell/golgi_apparatus.png
cell/intermediate_filaments.png
cell/lipid_droplets.png
cell/lysosomes.png
cell/microtubule_ends.png
cell/microtubule_organizing_center.png
cell/microtubules.png
cell/mitochondria.png
cell/nuclear_bodies.png
cell/nuclear_membrane.png
cell/nuclear_speckles.png
cell/nucleoli.png
cell/nucleoli_fibrillar_center.png
cell/nucleoplasm.png
cell/peroxisomes.png
cell/plasma_membrane.png
cell/rods_and_rings.png
cell/secreted_proteins.png
cran-comments.md
data-raw/allOrgans.tsv
data-raw/cell_20181017_Absolute_coords.tsv
data-raw/createAnatogramOther.R
data-raw/createAnatograms.R
data-raw/createCellogram.R
data-raw/extractCellularCoord.py
data-raw/getCoord.py
data-raw/getCoordOther.py
data-raw/homo_sapiens.female_coords.tsv
data-raw/homo_sapiens.male_coords.tsv
data-raw/mus_musculus.female_coords.tsv
data-raw/mus_musculus.male_coords.tsv
data-raw/other/anolis_carolinensis_coords.tsv
data-raw/other/arabidopsis_thaliana_coords.tsv
data-raw/other/bos_taurus_coords.tsv
data-raw/other/brachypodium_distachyon.flower_parts_coords.tsv
data-raw/other/brachypodium_distachyon.whole_plant_coords.tsv
data-raw/other/gallus_gallus_coords.tsv
data-raw/other/homo_sapiens.brain_coords.tsv
data-raw/other/homo_sapiens.female_coords.tsv
data-raw/other/homo_sapiens.male_coords.tsv
data-raw/other/hordeum_vulgare.flower_parts_coords.tsv
data-raw/other/hordeum_vulgare.whole_plant_coords.tsv
data-raw/other/macaca_mulatta_coords.tsv
data-raw/other/monodelphis_domestica_coords.tsv
data-raw/other/mus_musculus.brain_coords.tsv
data-raw/other/mus_musculus.female_coords.tsv
data-raw/other/mus_musculus.male_coords.tsv
data-raw/other/oryza_sativa.flower_parts_coords.tsv
data-raw/other/oryza_sativa.whole_plant_coords.tsv
data-raw/other/papio_anubis_coords.tsv
data-raw/other/rattus_norvegicus_coords.tsv
data-raw/other/solanum_lycopersicum.flower_parts_coords.tsv
data-raw/other/solanum_lycopersicum.whole_plant_coords.tsv
data-raw/other/solanum_tuberosum_coords.tsv
data-raw/other/sorghum_bicolor.flower_parts_coords.tsv
data-raw/other/sorghum_bicolor.whole_plant_coords.tsv
data-raw/other/tetraodon_nigroviridis_coords.tsv
data-raw/other/triticum_aestivum.flower_parts_coords.tsv
data-raw/other/triticum_aestivum.whole_plant_coords.tsv
data-raw/other/xenopus_tropicalis_coords.tsv
data-raw/other/zea_mays.flower_parts_coords.tsv
data-raw/other/zea_mays.whole_plant_coords.tsv
data-raw/svg/anolis_carolinensis.svg
data-raw/svg/arabidopsis_thaliana.svg
data-raw/svg/bos_taurus.svg
data-raw/svg/brachypodium_distachyon.flower_parts.svg
data-raw/svg/brachypodium_distachyon.whole_plant.svg
data-raw/svg/cell_20181017_Absolute.svg
data-raw/svg/gallus_gallus.svg
data-raw/svg/homo_sapiens.brain.svg
data-raw/svg/homo_sapiens.female.svg
data-raw/svg/homo_sapiens.male.svg
data-raw/svg/hordeum_vulgare.flower_parts.svg
data-raw/svg/hordeum_vulgare.whole_plant.svg
data-raw/svg/macaca_mulatta.svg
data-raw/svg/monodelphis_domestica.svg
data-raw/svg/mus_musculus.brain.svg
data-raw/svg/mus_musculus.female.svg
data-raw/svg/mus_musculus.male.svg
data-raw/svg/oryza_sativa.flower_parts.svg
data-raw/svg/oryza_sativa.whole_plant.svg
data-raw/svg/papio_anubis.svg
data-raw/svg/rattus_norvegicus.svg
data-raw/svg/solanum_lycopersicum.flower_parts.svg
data-raw/svg/solanum_lycopersicum.whole_plant.svg
data-raw/svg/solanum_tuberosum.svg
data-raw/svg/sorghum_bicolor.flower_parts.svg
data-raw/svg/sorghum_bicolor.whole_plant.svg
data-raw/svg/tetraodon_nigroviridis.svg
data-raw/svg/triticum_aestivum.flower_parts.svg
data-raw/svg/triticum_aestivum.whole_plant.svg
data-raw/svg/xenopus_tropicalis.svg
data-raw/svg/zea_mays.flower_parts.svg
data-raw/svg/zea_mays.whole_plant.svg
data/cell_key.rda
data/cell_list.rda
data/hgFemale_key.rda
data/hgFemale_list.rda
data/hgMale_key.rda
data/hgMale_list.rda
data/mmFemale_key.rda
data/mmFemale_list.rda
data/mmMale_key.rda
data/mmMale_list.rda
data/other_key.rda
data/other_list.rda
figure/AllSpeciesCellPlotValueTop-1.svg
figure/AllSpeciesCellPlotValueTop-2.svg
figure/AllSpeciesPlot-1.png
figure/AllSpeciesPlot-1.svg
figure/AllSpeciesPlotValue-1.svg
figure/CellPlotValueTop-1.svg
figure/Condition-1.png
figure/Condition-1.svg
figure/HsMm_val.png
figure/bosTaurus-1.svg
figure/cell_col.png
figure/cell_comb.png
figure/cell_val.png
figure/female-1.png
figure/female-1.svg
figure/femaleMouse-1.png
figure/femaleMouse-1.svg
figure/femaleMouseOrgan-1.png
figure/femaleMouseOrgan-1.svg
figure/femaleOrgans-1.png
figure/femaleOrgans-1.svg
figure/femaleRep-1.png
figure/femaleRep-1.svg
figure/maleMouse-1.png
figure/maleMouse-1.svg
figure/maleMouseOrgan-1.png
figure/maleMouseOrgan-1.svg
figure/maleOrgans-1.png
figure/maleOrgans-1.svg
figure/organPlot-1.png
figure/organPlot-1.svg
figure/organPlotAll-1.png
figure/organPlotAll-1.svg
figure/organPlotSubset-1.png
figure/organPlotSubset-1.svg
figure/organPlotValue-1.png
figure/organPlotValue-1.svg
figure/organPlotvoid-1.png
figure/organPlotvoid-1.svg
figure/other12.png
figure/other24.png
figure/othersFirst12-1.svg
figure/othersFirst12-2.svg
figure/othersFirst12-3.svg
figure/othersFirst12-4.svg
figure/othersFirst12-5.svg
figure/othersFirst12-6.svg
figure/unnamed-chunk-10-1.svg
figure/unnamed-chunk-10-2.svg
figure/unnamed-chunk-10-3.svg
figure/unnamed-chunk-10-4.svg
figure/unnamed-chunk-10-5.svg
figure/unnamed-chunk-10-6.svg
figure/unnamed-chunk-11-1.svg
figure/unnamed-chunk-11-2.svg
figure/unnamed-chunk-11-3.svg
figure/unnamed-chunk-11-4.svg
figure/unnamed-chunk-11-5.svg
figure/unnamed-chunk-11-6.svg
figure/unnamed-chunk-9-1.svg
figure/unnamed-chunk-9-2.svg
gganatogram.Rproj
inst/CITATION
man/cell_key.Rd
man/cell_list.Rd
man/get_anatogram.Rd
man/gganatogram.Rd
man/hgFemale_key.Rd
man/hgFemale_list.Rd
man/hgMale_key.Rd
man/hgMale_list.Rd
man/mmFemale_key.Rd
man/mmFemale_list.Rd
man/mmMale_key.Rd
man/mmMale_list.Rd
man/other_key.Rd
man/other_list.Rd
shiny/server.R
shiny/ui.R
tests/testthat.R
tests/testthat/test-gganatogram.R
tic.R
