dicom2analyze: Convert DICOM Header to Analyze

In neuroconductor-devel/oro.dicom: Rigorous - DICOM Input / Output

Convert DICOM Header to Analyze

Description

A subset of header information from DICOM is placed into Analyze 7.5 format.

Usage

dicom2analyze(
  dcm,
  datatype = 4,
  reslice = TRUE,
  DIM = 3,
  descrip = "SeriesDescription",
  digits = 2,
  ...
)

Arguments

dcm	DICOM object containing both header and image information.
datatype	is an integer that denotes the type of data contained in each voxel. See convert.datatype.anlz or the ANALYZE documentation for more details.
reslice	Logical variable (default = TRUE) indicating if the data volume should be resliced.
DIM	The dimension of the array to be used (default = 3D).
descrip	DICOM header field(s) to be included in the descrip
digits	Number of digits to use when rounding in swapDimension
...	Arguments to be passed to anlz

Details

See the references.

Value

An object of class anlz.

Author(s)

Brandon Whitcher [e-mail]

References

Analyze 7.5
https//eeg.sourceforge.net//ANALYZE75.pdf

Digital Imaging and Communications in Medicine (DICOM)
https://www.dicomstandard.org

See Also

convert.datatype.anlz, dicom2nifti, anlz

Examples

## Not run: 
dcmList <- dicomSeparate(system.file("hk-40", package="oro.dicom"))
require("oro.nifti")
dcmAnlz <- dicom2analyze(dcmList, datatype=4, mode="integer")
image(dcmAnlz)
orthographic(dcmAnlz)

## End(Not run)

neuroconductor-devel/oro.dicom documentation built on July 3, 2025, 11:50 p.m.