camino_voxelclassify: Wrapper for Camino 'voxelclassify' function
In neuroconductor-devel/rcamino: Port of the Camino Software

camino_voxelclassify

R Documentation

Wrapper for Camino `voxelclassify` function

Description

Performs the Camino voxelclassify function

Usage

camino_voxelclassify(infile, scheme, outfile = NULL,
  outputdatatype = NULL, mask = NULL, bgthresh = NULL,
  csfthresh = NULL, order = 4, ftest = NULL, verbose = TRUE)

Arguments

`infile`	input filename
`scheme`	Scheme file
`outfile`	output filename
`outputdatatype`	Specifies the data type of the output image, only relevant if `outfile` is not specified The data type can be any of the following strings: "byte", "short", "int", "long", "float" or "double".
`mask`	Character or `nifti` to mask out background.
`bgthresh`	background threshold value. If `mask` is specified, this is overridden. Ignored if `ftest` is not specified.
`csfthresh`	CSF threshold value
`order`	Set the maximum even spherical harmonic order that will be considered by the program. Must be a positive even number. Default is 4.
`ftest`	Specifies the F-test thresholds for adopting higher order models. A threshold must be provided for every order between 0 and the maximum order. The program will not consider a higher order model unless the result of the F-test is smaller than the relevant threshold.
`verbose`	Print diagnostic messages