download_xnat_dir: Download XNAT directory

In neuroconductor/Rxnat: Queries and Extracts Images from Extensible Neuroimaging Archive Toolkit Public/Private Datasets

Download XNAT directory

Description

Download a full directory of data

Usage

download_xnat_dir(conn, ...)

Arguments

conn	The XNAT connection returned by a xnat_connect call
...	experiment_ID the experiment Id for which we need to download data scan_type type of image scan zipped zip the downloaded result verbose Should progress be added to download? error Should function error if download failed? extract Unzip the result and return the files list (based on scan_type)

Value

Display path to the downloaded file

Examples

## Not run: nitrc <- xnat_connect('https://nitrc.org/ir', xnat_name='NITRC')
## Not run: download_xnat_dir(nitrc, 
                           experiment_ID='NITRC_IR_E10507',
                           scan_type='T2', 
                           file_dir = tempdir(),
                           extract = TRUE)

## End(Not run)

neuroconductor/Rxnat documentation built on April 1, 2024, 9:44 p.m.