Description Usage Arguments Value
Wrapper for running remove_neck
twice, as some images
require this if large number of slices of the neck or upper shoulders
were scanned
1 2 3 4 5 6 7 8 9 10 11 |
file |
File for neck removal - either filename or class nifti |
template.file |
Template to warp to original image space |
template.mask |
Mask of template to use as rough brain mask. If
|
typeofTransform |
Transformation for template to image, passed to
|
rep.value |
Value to replace neck slices with |
swapdim |
Should the dimensions be swapped before registration, and then reset after |
verbose |
Print out diagnostic messages |
ret_mask |
Should the mask be returned vs. the image? |
... |
Additional arguments passed to |
Object of class nifti
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