read.fs.surface.vtk: Read VTK ASCII format mesh as surface.

In neuroconductor/freesurferformats: Read and Write 'FreeSurfer' Neuroimaging File Formats

Description

This reads meshes (vtk polygon datasets) from text files in VTK ASCII format. See https://vtk.org/wp-content/uploads/2015/04/file-formats.pdf for format spec. Note that this function does **not** read arbitrary VTK datasets, i.e., it supports only a subset of the possible contents of VTK files (i.e., polygon meshes).

Usage

read.fs.surface.vtk(filepath)

Arguments

filepath

string. Full path to the input surface file in VTK ASCII format.

Value

named list. The list has the following named entries: "vertices": nx3 double matrix, where n is the number of vertices. Each row contains the x,y,z coordinates of a single vertex. "faces": nx3 integer matrix. Each row contains the vertex indices of the 3 vertices defining the face. WARNING: The indices are returned starting with index 1 (as used in GNU R). Keep in mind that you need to adjust the index (by substracting 1) to compare with data from other software.

Note

This is by far not a complete VTK format reader.

See Also

Other mesh functions: faces.quad.to.tris(), read.fs.surface.asc(), read.fs.surface.bvsrf(), read.fs.surface.geo(), read.fs.surface.gii(), read.fs.surface.ico(), read.fs.surface.obj(), read.fs.surface.off(), read.fs.surface.ply(), read.fs.surface(), read.mesh.brainvoyager(), read_nisurfacefile(), read_nisurface(), write.fs.surface.asc(), write.fs.surface.byu(), write.fs.surface.gii(), write.fs.surface.mz3(), write.fs.surface.vtk(), write.fs.surface()

neuroconductor/freesurferformats documentation built on May 20, 2021, 3:15 p.m.