magma_install: Install the MAGMA command line tool
In neurogenomics/MAGMA_Celltyping: Find Causal Cell-Types Underlying Complex Trait Genetics

magma_install

R Documentation

Install the MAGMA command line tool

Description

Checks whether MAGMA is currently installed, and if not, tries to automatically install it. For a list of all changes across MAGMA versions, please see here.

Usage

magma_install(
  dest_dir = find_install_dir(),
  desired_version = "latest",
  upgrade = FALSE,
  verbose = TRUE
)

Arguments

`dest_dir`	Folder in which to install MAGMA.
`desired_version`	Desired version of MAGMA.
`upgrade`	If MAGMA is already installed and is not the latest version, should it be upgraded to the latest version? (Default: `FALSE`).
`verbose`	Print messages.