Files in neurogenomics/scNLP
NLP for Single-cell Omics.
.Rbuildignore
.github/workflows/rworkflows.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/FindVariableFeatures_split.R
R/calc_specificity.R
R/data.R
R/drop_cols.R
R/drop_reduction_vars.R
R/get_ancestors.R
R/get_input_dat.R
R/gpt.R
R/infer_cluster_var.R
R/map_to_ontology.R
R/messager.R
R/plot_tfidf.R
R/run_gpt.R
R/run_tfidf.R
R/search_neighbors.R
R/seurat_pipeline.R
R/stopper.R
R/tfidf.R
R/tfidf_label_markers.R
R/wordcloud_heatmap.R
R/wordcloud_tfidf.R
README.Rmd
README.md
README_files/figure-gfm/unnamed-chunk-3-1.png
data/pseudo_sce.rda
data/pseudo_seurat.rda
inst/OnClass_code/Ontology_data/allen.ontology
inst/OnClass_code/Ontology_data/cl.obo
inst/OnClass_code/Ontology_data/cl.ontology
inst/OnClass_code/Ontology_data/cl.ontology.nlp.emb
inst/OnClass_code/__pycache__/config.cpython-37.pyc
inst/OnClass_code/__pycache__/utils.cpython-37.pyc
inst/OnClass_code/config.py
inst/OnClass_code/utils.py
inst/hex/hex.gif
inst/hex/hex.png
inst/hex/hexSticker.Rmd
inst/hex/scNLP_text.pdf
man/FindVariableFeatures_split.Rd
man/get_ancestors.Rd
man/gpt.Rd
man/messager.Rd
man/plot_tfidf.Rd
man/pseudo_sce.Rd
man/pseudo_seurat.Rd
man/run_gpt.Rd
man/run_tfidf.Rd
man/search_neighbors.Rd
man/seurat_pipeline.Rd
man/stopper.Rd
man/tfidf.Rd
man/tfidf_label_markers.Rd
man/wordcloud_tfidf.Rd
scNLP.Rproj
vignettes/.gitignore
vignettes/harmonise_celltypes.Rmd
vignettes/tf-idf.Rmd
