plot_lollipop: Plot cell type prioritizations as a 'lollipop' plot
In neurorestore/Augur: Cell type prioritization in high-dimensional single-cell data
View source: R/plot_lollipop.R
plot_lollipop R Documentation
Plot cell type prioritizations as a 'lollipop' plot
Description
Plot the complete ranked list of prioritized cell types as a 'lollipop' plot
(similar to a bar chart, except with each bar replaced by a point and line).
In addition, the exact value of the mean AUC, to three decimal places, is
printed in the plot for each cell type. For an example, see
Extended Data Fig. 7b from
doi:10.1038/s41587-020-0605-1.
Usage
plot_lollipop(augur)
Arguments
augur
a set of Augur results obtained from calculate_auc
Value
a ggplot2 object
neurorestore/Augur documentation built on Feb. 28, 2024, 3:03 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/plot_lollipop.R
| plot_lollipop | R Documentation |
Plot cell type prioritizations as a 'lollipop' plot
Description
Plot the complete ranked list of prioritized cell types as a 'lollipop' plot (similar to a bar chart, except with each bar replaced by a point and line). In addition, the exact value of the mean AUC, to three decimal places, is printed in the plot for each cell type. For an example, see Extended Data Fig. 7b from doi:10.1038/s41587-020-0605-1.
Usage
plot_lollipop(augur)
Arguments
augur |
a set of Augur results obtained from |
Value
a ggplot2 object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.