fb_parse: Parse data from non-standard traits

In neyhartj/fbutils: Data Processing in Agriculture Field Trials

Description

Parse data from non-standard traits

Usage

fb_parse(fbt, traits, sep = ":", n.obs = 10)

Arguments

fbt	A Field Book Table object.
traits	A character vector of trait names identifying which column(s) in the fbt object file to parse.
sep	Character(s) used to split the multicat data entries.
n.obs	An numeric vector of integers describing the number of desired datapoint observations in a multicat trait. The first n observations will be included and the remainder discarded For instance, if one of the multicat data points was "1:2:3:4:5" and n.obs was set to 3, the resulting data would be "1 2 3". The vector must be the same length as 'traits.'

Value

An fbt object with un-parsed trait columns and with with individual columns for each datapoint entry in each multicat trait. The mean and standard deviation of all datapoint entries are also included.

Examples

data("fbt_sample")

# Parse the 'Multi' trait
fbt1 <- fb_parse(fbt = fbt_sample, traits = "Multi", sep = ":")

neyhartj/fbutils documentation built on Feb. 10, 2020, 1:45 p.m.