boot_cor | Bootstrap a correlation |
convert_hapmap | Convert a hapmap to a genotype matrix |
cross_val | Run cross-validation of a training set |
filter_genos | Filter a hapmap or genotype matrix |
fixef_model_matrix | Create a fixed effect incidence matrix |
frac.xval | Fractional Cross Validation |
geno_summary | Summarize a marker matrix |
G_mat | Calculate a genomic relationship matrix from marker... |
G_PCA | Plot the principal components of a genomic relationship... |
hapmap_encoding | Change the encoding of a hapmap file |
kfold.xval | K-fold Cross Validation |
measure.het | Measure the heterozygosity of a SNP or entry |
measure.maf | Measure the minor allele frequency of a SNP |
measure.missing | Measure the missingness of a SNP or entry |
mppop.predict | Predict genetic variance and genetic correlations in... |
phenos | Example data |
pop.predict2 | Predict genetic variance and genetic correlations using a... |
ranef_model_matrix | Create a random effect incidence matrix |
resid_model_matrix | Create a residual effect covariance matrix |
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