| do_GPS_analysis | Combines GPS prediction with given set of pSites |
| export_GPS_analysis | Combines and exports GPS analysis tables |
| export_GPS_fasta | Subsets a given fasta file by given proteins for GPS 5.0 PTM... |
| extract_pSites | Extract phosphosite in standard format from PhospoSitePlus... |
| hello | Hello, World! |
| import_GPS_results | Imports GPS 5.0 results file |
| import_kinhub_kinase_list | Imports list of kinases from kinhub |
| summarize_ptmProteins | Summarize modified peptides and modification sites per... |
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