saalg2: Tree growth
In ningshi/ATEN: ATEN
Description
Usage
Arguments
Value
Description
A helper function for running tree-growth based on simulated annealling algorithm
Usage
1
Arguments
data
A data list generated by buildTimeSeries or bootstrap
maxK
The size of the tree, or the maximum number of input genes; By defalt, maxK=8
initT
the upper temperature (on a log10 scale)
endT
the lower temperature (on a log10 scale)
iter
the maximum number of iterations used in simulated annealing algorithm
pis
A list of prime implicants
allnodes
The number of genes in the Boolean network
Value
An And/Or tree
ningshi/ATEN documentation built on April 27, 2021, 7:40 a.m.
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Description Usage Arguments Value
Description
A helper function for running tree-growth based on simulated annealling algorithm
Usage
1 |
Arguments
data |
A data list generated by buildTimeSeries or bootstrap |
maxK |
The size of the tree, or the maximum number of input genes; By defalt, maxK=8 |
initT |
the upper temperature (on a log10 scale) |
endT |
the lower temperature (on a log10 scale) |
iter |
the maximum number of iterations used in simulated annealing algorithm |
pis |
A list of prime implicants |
allnodes |
The number of genes in the Boolean network |
Value
An And/Or tree
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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