tests/testthat/_snaps/setting-prediction-matrix.md

In njtierney/conmat: Builds Contact Matrices using GAMs and Population Data

setting_prediction_matrix works

Code
  setting_prediction_matrix(home = one_by_nine, work = one_by_nine, age_breaks = age_breaks_0_80_plus)
Message

  -- Setting Prediction Matrices -------------------------------------------------
Output

Message
  A list of matrices containing the model predicted contact rate between ages in
  each setting.
Output

Message
  There are 9 age breaks, ranging 0-80+ years, with a regular 10 year interval
Output

Message
  * home: a 9x9 <matrix>
  * work: a 9x9 <matrix>
  * all: a 9x9 <matrix>
  i Access each <matrix> with `x$name`
  i e.g., `x$home`

as_setting_prediction_matrix works

Code
  as_setting_prediction_matrix(mat_list, age_breaks = age_breaks_0_80_plus)
Message

  -- Setting Prediction Matrices -------------------------------------------------
Output

Message
  A list of matrices containing the model predicted contact rate between ages in
  each setting.
Output

Message
  There are 9 age breaks, ranging 0-80+ years, with a regular 10 year interval
Output

Message
  * home: a 9x9 <matrix>
  * work: a 9x9 <matrix>
  * all: a 9x9 <matrix>
  i Access each <matrix> with `x$name`
  i e.g., `x$home`

as_setting_prediction_matrix warns when setting pred matrix given

Code
  as_setting_prediction_matrix(setting_mat, age_breaks = age_breaks_0_80_plus)
Condition
  Warning:
  `as_setting_prediction_matrix` not used as this object is alreadt of a <conmat_setting_prediction_matrix> method not implemented for <conmat_setting_prediction_matrix/list>.

as_setting_prediction_matrix fails when wrong object given

Code
  as_setting_prediction_matrix(iris, age_breaks = age_breaks_0_80_plus)
Condition
  Error in `as_setting_prediction_matrix()`:
  ! `as_setting_prediction_matrix` method not implemented for <data.frame>

njtierney/conmat documentation built on April 17, 2025, 10:27 p.m.