oxiquant: 'oxiquant' package

Description Usage Arguments Value

View source: R/oxiquant.R

Description

Automated analysis of mass spectrometry data collected during hydroxyl radical footprinting experiment

Usage

1
oxiquant(msgf = FALSE, process_ms1 = FALSE, extract_ion_current = TRUE)

Arguments

msgf

Run MS-GF+ MS2 search engine, logical, default = FALSE.

process_ms1

Run mzcharge for MS1 data processing, logical, default = FALSE.

extract_ion_current

Extract ion current for intact and oxidized peptides, logical, default = TRUE.

Value

oxiquant saves tables in Global Environment for interactive use and writes corresponding CVS files in working directory


nktvslv/oxiquant documentation built on June 10, 2021, 3:16 p.m.