tests/testthat/_snaps/lotri.md

In nlmixrdevelopment/lotri: A Simple Way to Specify Symmetric, Block Diagonal Matrices

lotri matrix parsing

$id
    et1
et1   1

$id2
    et2
et2   3

Properties: df

List of 3
 $ id : num [1, 1] 1
  ..- attr(*, "dimnames")=List of 2
  .. ..$ : chr "et1"
  .. ..$ : chr "et1"
 $ id2: num [1, 1] 3
  ..- attr(*, "dimnames")=List of 2
  .. ..$ : chr "et2"
  .. ..$ : chr "et2"
 $ df :List of 1
  ..$ id: num 3

fixed tests

     a    b    c
a 40.0  0.1  0.1
b  0.1 20.0  0.1
c  0.1  0.1 30.0
this matrix has fixed elements

Combined estimates and matrix

Lotri Estimates (get with `lotriEst()`):
  name lower est upper   fix   label backTransform
1    a     0   1   Inf FALSE a label           exp
2    b     0   1     2 FALSE    <NA>          <NA>
3    c  -Inf   1   Inf  TRUE    <NA>          <NA>
4    d     0   1     2  TRUE    <NA>          <NA>
5    e     0   1     2  TRUE    <NA>          <NA>

Lotri Estimates (get with `lotriEst()`):
  name lower est upper   fix   label backTransform
1    a     0   1   Inf FALSE a label           exp
2    b     0   1     2 FALSE    <NA>          <NA>
3    c  -Inf   1   Inf  TRUE    <NA>          <NA>
4    d     0   1     2  TRUE    <NA>          <NA>
5    e     0   1     2  TRUE    <NA>          <NA>

Matrix:
    f   g
f 1.0 0.5
g 0.5 1.0

as.data.frame

Lotri Estimates (get with `lotriEst()`):
  name lower est upper   fix   label backTransform
1    a     0   1   Inf FALSE a label           exp
2    b     0   1     2 FALSE    <NA>          <NA>
3    c  -Inf   1   Inf  TRUE    <NA>          <NA>
4    d     0   1     2  TRUE    <NA>          <NA>
5    e     0   1     2  TRUE    <NA>          <NA>

Matrix:
    f   g
f 1.0 0.5
g 0.5 1.0
this matrix has fixed elements

Lotri Estimates (get with `lotriEst()`):
   name lower est upper   fix   label backTransform
1     a     0   1   Inf FALSE a label           exp
2     b     0   1     2 FALSE    <NA>          <NA>
3     c  -Inf   1   Inf  TRUE    <NA>          <NA>
4     d     0   1     2  TRUE    <NA>          <NA>
5     e     0   1     2  TRUE    <NA>          <NA>
6     h     0   1   Inf FALSE b label         expit
7     i     0   1     2 FALSE    <NA>          <NA>
8     j  -Inf   1   Inf  TRUE    <NA>          <NA>
9     k     0   1     2  TRUE    <NA>          <NA>
10    l     0   1     2  TRUE    <NA>          <NA>

$id
    m   n
m 1.0 0.5
n 0.5 1.0

$occ
    f   g
f 1.0 0.5
g 0.5 1.0
this matrix has fixed elements

nlmixrdevelopment/lotri documentation built on April 22, 2021, 2:21 a.m.