moduleNumber: Fixed-height cut of a dendrogram.
In nosarcasm/WGCNA: Weighted Correlation Network Analysis

Description Usage Arguments Details Value Note Author(s) See Also

Detects branches of on the input dendrogram by performing a fixed-height cut.

1	moduleNumber(dendro, cutHeight = 0.9, minSize = 50)

`dendro`	a hierarchical clustering dendorgram such as one returned by `hclust`.
`cutHeight`	Maximum joining heights that will be considered.
`minSize`	Minimum cluster size.

All contiguous branches below the height cutHeight that contain at least minSize objects are assigned unique positive numerical labels; all unassigned objects are assigned label 0.

A vector of numerical labels giving the assigment of each object.

The numerical labels may not be sequential. See normalizeLabels for a way to put the labels into a standard order.

Peter Langfelder, Peter.Langfelder@gmail.com

hclust, cutree, normalizeLabels

nosarcasm/WGCNA documentation built on May 28, 2019, 1:01 p.m.