CoreAligner: A function for aligning core genomes. Requires a list of...

Description Usage Arguments Examples

View source: R/CoreAlignment.R

Description

A function for aligning core genomes. Requires a list of matrices, indicating the homologs present, by gene index, in each genome (column).

Usage

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CoreAligner(ListOfSets, PATH, GeneCalls, Verbose = FALSE)

Arguments

ListOfSets

A list of matrices

PATH

A character string identifying a sqlite database

GeneCalls

A list of dataframes, one for each genome, with named columns "Start", "Stop", and "Strand"

Examples

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npcooley/FindHomology documentation built on May 28, 2019, 5:40 a.m.