marginal.edge.bayes.plot: marginal edge plot for bayes posterior parameter output

In npetraco/CRFutil: Handy Utility Functions for Use with CRF and gRbase packages

marginal edge plot for bayes posterior parameter output

Description

Plots posterior dists for tau1, tau2 and omega Handy to help check for relative abundance of X1 and X1 (tau's) and total marginal independence between X1 and X2 (omega)

Usage

marginal.edge.bayes.plot(
  posterior.edge.pot.mat,
  type = "logpot",
  prob.level = 0.95
)

Arguments

posterior.edge.pot.mat	Posterior potentials from marginal.edge.bayes.loglin. Usually rescaled.posterior.pots portion.
type	"logpot" (energies) or "pot" (potentials = exp(energies))
prob.level	Desired width of HPDI intervals plotted

Details

If rescaled.posterior.pots are used tau's = 0 (exp(tau's)=1) indicate about state 1 is about as abundant as state 2. omega = 0 indicates no dependence between X1 and X2

Value

The function will XX

npetraco/CRFutil documentation built on Nov. 23, 2023, 11:30 a.m.