Files in npetraco/bayes705
A little convenience package for MAT/FOS 705 at John Jay
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/TODO.txt
R/dom.R
R/nested_sampling_from_babar.R
R/nested_sampling_plots.R
R/params2priors_from_babar.R
R/process.dnest.info.R
R/utils.R
bayes705.Rproj
inst/DNest4/include/Barrier.h
inst/DNest4/include/CommandLineOptions.h
inst/DNest4/include/DNest4.h
inst/DNest4/include/Distributions/Cauchy.h
inst/DNest4/include/Distributions/ContinuousDistribution.h
inst/DNest4/include/Distributions/Laplace.h
inst/DNest4/include/Level.h
inst/DNest4/include/LikelihoodType.h
inst/DNest4/include/Options.h
inst/DNest4/include/RJObject/ConditionalPriors/BasicCircular.h
inst/DNest4/include/RJObject/ConditionalPriors/ClassicMassInf.h
inst/DNest4/include/RJObject/ConditionalPriors/ClassicMassInf1D.h
inst/DNest4/include/RJObject/ConditionalPriors/ConditionalPrior.h
inst/DNest4/include/RJObject/ConditionalPriors/Pareto.h
inst/DNest4/include/RJObject/RJObject.h
inst/DNest4/include/RJObject/RJObjectImpl.h
inst/DNest4/include/RNG.h
inst/DNest4/include/Sampler.h
inst/DNest4/include/SamplerImpl.h
inst/DNest4/include/Start.h
inst/DNest4/include/StartImpl.h
inst/DNest4/include/Utils.h
inst/DNest4/include/Version.h
inst/DNest4/lib/libdnest4.a
inst/nets/ArtistTrace.net
inst/nets/golf.net
inst/nets/testnet.net
man/hello.Rd
tests/BN_evidence_set_expt1.R
tests/BN_test1.R
tests/Dnest_2D-gaussian_shells_test/2D-shells_pdfs.nb
tests/Dnest_2D-gaussian_shells_test/Makefile
tests/Dnest_2D-gaussian_shells_test/MyModel.cpp
tests/Dnest_2D-gaussian_shells_test/MyModel.cpp.template
tests/Dnest_2D-gaussian_shells_test/MyModel.cpp1
tests/Dnest_2D-gaussian_shells_test/MyModel.h
tests/Dnest_2D-gaussian_shells_test/MyModel.h.template
tests/Dnest_2D-gaussian_shells_test/MyModel.h1
tests/Dnest_2D-gaussian_shells_test/OPTIONS
tests/Dnest_2D-gaussian_shells_test/histograms_view.R
tests/Dnest_2D-gaussian_shells_test/main.cpp
tests/Dnest_2D-gaussian_shells_test/model_gen.py
tests/Dnest_2D-gaussian_shells_test/model_gen.py1
tests/Dnest_2D-gaussian_shells_test/showresults.py
tests/Dnest_Builder_coal/Makefile
tests/Dnest_Builder_coal/MyModel.cpp
tests/Dnest_Builder_coal/MyModel.cpp.template
tests/Dnest_Builder_coal/MyModel.h
tests/Dnest_Builder_coal/MyModel.h.template
tests/Dnest_Builder_coal/OPTIONS
tests/Dnest_Builder_coal/coal.py
tests/Dnest_Builder_coal/main.cpp
tests/Dnest_Builder_coal/showresults.py
tests/Dnest_Builder_line/Makefile
tests/Dnest_Builder_line/MyModel.cpp
tests/Dnest_Builder_line/MyModel.cpp.template
tests/Dnest_Builder_line/MyModel.h
tests/Dnest_Builder_line/MyModel.h.template
tests/Dnest_Builder_line/OPTIONS
tests/Dnest_Builder_line/for_blog.py
tests/Dnest_Builder_line/main.cpp
tests/Dnest_Builder_line/showresults.py
tests/Dnest_Builder_rats/Makefile
tests/Dnest_Builder_rats/MyModel.cpp
tests/Dnest_Builder_rats/MyModel.cpp.template
tests/Dnest_Builder_rats/MyModel.h
tests/Dnest_Builder_rats/MyModel.h.template
tests/Dnest_Builder_rats/OPTIONS
tests/Dnest_Builder_rats/main.cpp
tests/Dnest_Builder_rats/rats.py
tests/Dnest_Builder_rats/showresults.py
tests/Dnest_Builder_spike-slab_test/Makefile
tests/Dnest_Builder_spike-slab_test/MyModel.cpp
tests/Dnest_Builder_spike-slab_test/MyModel.cpp.template
tests/Dnest_Builder_spike-slab_test/MyModel.h
tests/Dnest_Builder_spike-slab_test/MyModel.h.template
tests/Dnest_Builder_spike-slab_test/OPTIONS
tests/Dnest_Builder_spike-slab_test/Spike_Slab_1D_pdf.nb
tests/Dnest_Builder_spike-slab_test/main.cpp
tests/Dnest_Builder_spike-slab_test/model_gen.py
tests/Dnest_Builder_spike-slab_test/showresults.py
tests/Dnest_Bullard_spike_test/BullardSpike.cpp
tests/Dnest_Bullard_spike_test/BullardSpike.h
tests/Dnest_Bullard_spike_test/Data.cpp
tests/Dnest_Bullard_spike_test/Data.h
tests/Dnest_Bullard_spike_test/Makefile
tests/Dnest_Bullard_spike_test/OPTIONS
tests/Dnest_Bullard_spike_test/analysis_expts1.R
tests/Dnest_Bullard_spike_test/analysis_expts1.py
tests/Dnest_Bullard_spike_test/analysis_expts2.py
tests/Dnest_Bullard_spike_test/classic.py
tests/Dnest_Bullard_spike_test/dat.txt
tests/Dnest_Bullard_spike_test/display.py
tests/Dnest_Bullard_spike_test/file_sandwhich.csv
tests/Dnest_Bullard_spike_test/loading.py
tests/Dnest_Bullard_spike_test/main.cpp
tests/Dnest_Bullard_spike_test/posterior_sample.R
tests/Dnest_Bullard_spike_test/showresults.py
tests/Dnest_DanielA/Makefile
tests/Dnest_DanielA/MyModel.cpp
tests/Dnest_DanielA/MyModel.cpp.template
tests/Dnest_DanielA/MyModel.h
tests/Dnest_DanielA/MyModel.h.template
tests/Dnest_DanielA/OPTIONS
tests/Dnest_DanielA/main.cpp
tests/Dnest_DanielA/model_gen.py
tests/Dnest_DanielA/showresults.py
tests/Dnest_Kobe/Model1_analytical.nb
tests/Dnest_Kobe/Model2_analytical.nb
tests/Dnest_Kobe/model1/Makefile
tests/Dnest_Kobe/model1/MyModel.cpp
tests/Dnest_Kobe/model1/MyModel.cpp.template
tests/Dnest_Kobe/model1/MyModel.h
tests/Dnest_Kobe/model1/MyModel.h.template
tests/Dnest_Kobe/model1/OPTIONS
tests/Dnest_Kobe/model1/main.cpp
tests/Dnest_Kobe/model1/model_gen.py
tests/Dnest_Kobe/model1/showresults.py
tests/Dnest_Kobe/model2/Makefile
tests/Dnest_Kobe/model2/MyModel.cpp
tests/Dnest_Kobe/model2/MyModel.cpp.template
tests/Dnest_Kobe/model2/MyModel.cpp1
tests/Dnest_Kobe/model2/MyModel.h
tests/Dnest_Kobe/model2/MyModel.h.template
tests/Dnest_Kobe/model2/MyModel.h1
tests/Dnest_Kobe/model2/OPTIONS
tests/Dnest_Kobe/model2/analysis.R
tests/Dnest_Kobe/model2/analysis_disect_classic-py_output.R
tests/Dnest_Kobe/model2/analysis_disect_classic-py_output2.R
tests/Dnest_Kobe/model2/analysis_disect_classic-py_output3.R
tests/Dnest_Kobe/model2/levels.txt
tests/Dnest_Kobe/model2/main
tests/Dnest_Kobe/model2/main.cpp
tests/Dnest_Kobe/model2/model_gen.py
tests/Dnest_Kobe/model2/posterior_sample.txt
tests/Dnest_Kobe/model2/sample.txt
tests/Dnest_Kobe/model2/sample_info.txt
tests/Dnest_Kobe/model2/sampler_state.txt
tests/Dnest_Kobe/model2/showresults.py
tests/Dnest_Kobe/model2/weights.txt
tests/Dnest_Lindley_glass/Makefile
tests/Dnest_Lindley_glass/MyModel.cpp
tests/Dnest_Lindley_glass/MyModel.cpp.template
tests/Dnest_Lindley_glass/MyModel.h
tests/Dnest_Lindley_glass/MyModel.h.template
tests/Dnest_Lindley_glass/OPTIONS
tests/Dnest_Lindley_glass/main.cpp
tests/Dnest_Lindley_glass/model_gen.py
tests/Dnest_Lindley_glass/model_gen_Hd.py
tests/Dnest_Lindley_glass/model_gen_Hp.py
tests/Dnest_Lindley_glass/showresults.py
tests/Dnest_StraightLine_test/Data.cpp
tests/Dnest_StraightLine_test/Data.h
tests/Dnest_StraightLine_test/Makefile
tests/Dnest_StraightLine_test/OPTIONS
tests/Dnest_StraightLine_test/StraightLine.cpp
tests/Dnest_StraightLine_test/StraightLine.h
tests/Dnest_StraightLine_test/display.py
tests/Dnest_StraightLine_test/main.cpp
tests/Dnest_StraightLine_test/road.txt
tests/Dnest_StraightLine_test/showresults.py
tests/Dnest_bi-modal_lik_test/Analytic_Z_bi-modal.nb
tests/Dnest_bi-modal_lik_test/Analytic_Z_bi-modal_pathological.nb
tests/Dnest_bi-modal_lik_test/Analytic_Z_uni-modal.nb
tests/Dnest_bi-modal_lik_test/Makefile
tests/Dnest_bi-modal_lik_test/MyModel.cpp
tests/Dnest_bi-modal_lik_test/MyModel.cpp.template
tests/Dnest_bi-modal_lik_test/MyModel.h
tests/Dnest_bi-modal_lik_test/MyModel.h.template
tests/Dnest_bi-modal_lik_test/OPTIONS
tests/Dnest_bi-modal_lik_test/main.cpp
tests/Dnest_bi-modal_lik_test/model_gen.py
tests/Dnest_bi-modal_lik_test/model_gen2.py
tests/Dnest_bi-modal_lik_test/posterior_view.R
tests/Dnest_bi-modal_lik_test/showresults.py
tests/Dnest_eggbox_test/Eggbox_PDF.nb
tests/Dnest_eggbox_test/Makefile
tests/Dnest_eggbox_test/MyModel.cpp
tests/Dnest_eggbox_test/MyModel.cpp.template
tests/Dnest_eggbox_test/MyModel.h
tests/Dnest_eggbox_test/MyModel.h.template
tests/Dnest_eggbox_test/OPTIONS
tests/Dnest_eggbox_test/histograms_view.R
tests/Dnest_eggbox_test/main.cpp
tests/Dnest_eggbox_test/model_gen.py
tests/Dnest_eggbox_test/showresults.py
tests/Dnest_orbital_test/Makefile
tests/Dnest_orbital_test/MyModel.cpp
tests/Dnest_orbital_test/MyModel.cpp.template
tests/Dnest_orbital_test/MyModel.cpp2
tests/Dnest_orbital_test/MyModel.h
tests/Dnest_orbital_test/MyModel.h.template
tests/Dnest_orbital_test/OPTIONS
tests/Dnest_orbital_test/histograms_view.R
tests/Dnest_orbital_test/main.cpp
tests/Dnest_orbital_test/model_gen.py
tests/Dnest_orbital_test/orbital_pdfs.nb
tests/Dnest_orbital_test/orbital_pdfs2.nb
tests/Dnest_orbital_test/orbital_pdfs3.nb
tests/Dnest_orbital_test/showresults.py
tests/Dnest_pines/Makefile
tests/Dnest_pines/MyModel.cpp
tests/Dnest_pines/MyModel.cpp.template
tests/Dnest_pines/MyModel.h
tests/Dnest_pines/MyModel.h.template
tests/Dnest_pines/OPTIONS
tests/Dnest_pines/Pines_Bayes_factors_WINBUGS_Classic_Examps_Vol-II.pdf
tests/Dnest_pines/Pines_Bayes_factors_WINBUGS_Examps_Vol-III.pdf
tests/Dnest_pines/bf.pines_JAGS_analysis.R
tests/Dnest_pines/carlin-chib.pdf
tests/Dnest_pines/main.cpp
tests/Dnest_pines/model_gen.py
tests/Dnest_pines/pines.bug
tests/Dnest_pines/showresults.py
tests/Dnest_template/Makefile
tests/Dnest_template/MyModel.cpp.template
tests/Dnest_template/MyModel.h.template
tests/Dnest_template/OPTIONS
tests/Dnest_template/main.cpp
tests/Dnest_template/model_gen.py
tests/Dnest_template/showresults.py
tests/Half-Cauchy.nb
tests/Shenkin_flu_test/Log-Likelihoods.nb
tests/Shenkin_flu_test/Z_Baseline_model.nb
tests/Shenkin_flu_test/Z_Dependent_models.nb
tests/Shenkin_flu_test/Z_Dependent_models2.nb
tests/Shenkin_flu_test/Z_Dependent_models3.nb
tests/Shenkin_flu_test/Z_Depenten_model.nb
tests/Shenkin_flu_test/unc_BF.nb
tests/babar/babar_ouput_disection1.R
tests/babar/babar_ouput_disection2.R
tests/babar/test.babar4_Box-Gelman.R
tests/babar/test.babar5_Bullard_spike.R
tests/babar/test.babar6_Bullard_two_rabbits.R
tests/babar/test.babar_Flu_Dep1.R
tests/babar/test.babar_Flu_Dep1_unc.R
tests/babar/test.babar_Flu_Dep2.R
tests/babar/test.babar_Flu_Dep3.R
tests/babar/test.babar_Flu_Mathematica_Results.xlsx
tests/babar/test.babar_Flu_Random.R
tests/babar/test.babar_Flu_unc.R
