AOPN.linear.AOPs: AOPN.linear.AOPs

In npollesch/AOPNet: Adverse Outcome Pathway Network Analysis Tools

Description

Determines all linear AOPs (ie simple paths) between all possible MIE and AO pairs (or "ORIGIN" and "TERMINUS" if desired)

Usage

AOPN.linear.AOPs(g, use_KE_PD = FALSE)

Arguments

g	AOP igraph object, with vertex attribute KE_KED (values "MIE", "KE", or "AO"), must also have "names" attribute [igraph object]
use_KE_PD	Optional (Default=FALSE): Can use KE_PD ("origin" and "terminus") instead of KE_KED [boolean]

Value

OUTPUT is a "List of a List" of all paths (by vertex) between all MIE/AO pairs (or origin/terminus pairs) List objects are named by the MIE/AO pair involved List objects are Lists of all paths (by vertex) between the MIE and AO for which the List is named [list]

See Also

Other AOPNet Operations: AOPN.edge.connectivity, topo.layout

npollesch/AOPNet documentation built on Jan. 9, 2021, 12:39 a.m.