findOutlier: Identify outliers using the ROUT method REF:...

Description Usage Arguments Value

View source: R/ccOutliers.R

Description

Identify outliers using the ROUT method REF: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-7-123

Usage

1
findOutlier(dat, Q = 0.05, outliers = F)

Arguments

dat

The data object as loaded by loadData()

Q

FDR trheshold - default 0.05

outliers

Boolean indicating if outliers should be kept and returned (T) or removed (F). Default is FALSE.

Value

A data frame with outliers for each genotype/conditoin pairing removed (outliers=F).


nraun/ccTools documentation built on Dec. 22, 2021, 3:15 a.m.