R/vsets.R

In nsahr/gMRPP: Generalized Multi-Response Permutation Procedure

#' KEGG gene set data for the AML and CML pathways
#'
#' A data set with the list of ensemble gene identifiers for the
#' acute myeloid leukemia (AML) and chronic myeloid leukemia
#' pathways as defined in the KEGG pathway database
#'
#' A dataset with assignments of ensemble gene identifiers (ENSG) to
#' KEGG pathway names
#' 
#' @format A data frame with 128 rows and 2 columns
#' \describe{
#'   \item{vset}{KEGG pathway name}
#'   \item{vID}{Ensemble gene (ENSG) identifier}
#'  }
#' @source \url{http://software.broadinstitute.org/gsea/msigdb/cards/KEGG_CHRONIC_MYELOID_LEUKEMIA}
#' \url{http://software.broadinstitute.org/gsea/msigdb/cards/KEGG_ACUTE_MYELOID_LEUKEMIA}
#' Merged with information from \url{ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz}
#' to translate gene symbols to Ensemble gene (ENSG) identifiers
"vsets"