dipPeak: Parzen density estimation plus peak divider based on dips
In nsheff/dipPeak: A Parzen Density Estimator and Peak Finder
Description
Details
Author(s)
References
Description
dipPeak identifies peaks in high-throughput sequencing data.
It is designed for use with DNase-seq data, but could be useful for
other data types as well. It does two tasks: First, identifies broad
peaks (hypersensitive regions), and then it divides these peaks into
smaller regions of interest to be considered separately.
Details
It also has the advantage of allowing user control over the resolution
of the output density. This can allow the user to determine the tradeoff
between disk space and resolution.
Author(s)
Nathan Sheffield
References
nsheff/dipPeak documentation built on May 24, 2019, 7:50 a.m.
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Description Details Author(s) References
Description
dipPeak identifies peaks in high-throughput sequencing data. It is designed for use with DNase-seq data, but could be useful for other data types as well. It does two tasks: First, identifies broad peaks (hypersensitive regions), and then it divides these peaks into smaller regions of interest to be considered separately.
Details
It also has the advantage of allowing user control over the resolution of the output density. This can allow the user to determine the tradeoff between disk space and resolution.
Author(s)
Nathan Sheffield
References
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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