simulate_IBD_corMLPE: Simulate data from an isolation-by-distance model with MLPE...

In nspope/corMLPE: A correlation structure for symmetric relational data

Simulate data from an isolation-by-distance model with MLPE correlation structure

Description

Simulate data from an isolation-by-distance model with MLPE correlation structure

Usage

simulate_IBD_corMLPE(
  sets = 1,
  elements = rep(10, sets),
  intercept = 0,
  slope = 0.5,
  random_effects = diag(2),
  correlation = 0.25,
  residual_sd = 1,
  distances = NULL,
  seed = 1
)

Arguments

sets	number of distinct sets (e.g. species) containing elements that are compared
elements	vector, number of elements (e.g. populations, individuals) in each set
intercept	intercept of regression line
slope	slope of regression line
random_effects	variance-covariance matrix for random intercepts/slopes per set; ignored if sets==1
correlation	parameter of MLPE correlation structure; between 0 and 0.5
residual_sd	standard deviation of (correlated) errors
distances	optional; list of distance matrices (one for each set), or a single distance matrix if sets==1; if absent, locations are simulated from a 2d uniform distribution
seed	random seed used to simulate data

nspope/corMLPE documentation built on April 8, 2022, 3:48 a.m.