ntyet/rmRNAseq: RNA-Seq Analysis for Repeated-Measures Data

A differential expression analysis method for RNA-seq data from repeated-measures design using general linear model framework and parametric bootstrap inference. The method accounts for the dependence of gene expression levels due to the repeated-measures through continuous autoregressive correlation structure. The method is described in Chapter 4 of Nguyen (2018) <https://lib.dr.iastate.edu/cgi/viewcontent.cgi?article=7433&context=etd>.

install.packages("remotes")
remotes::install_github("ntyet/rmRNAseq")